Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03155 ATGAGGAAACCAGAGATATCTGGAAAAAACAATTCCAACAATAAGCTTAGAAAAGGATTATGGTCACCAGAGGAAGATGATAAGCTGATGAACTACATGTTAAACAGTGGACAAGGTTGTTGGAGTGATGTAGCAAGAAATGCTGGATTGCAAAGGTGTGGAAAAAGTTGTAGGCTAAGATGGATTAATTATTTGAGACCTGATCTTAAACGTGGTGCATTCTCACCACAAGAAGAAGAACTTATCATCCATCTGCATTCCCTTCTTGGAAACAGATGGTCACAAATAGCAGCACGCCTGCCTGGGAGAACGGACAATGAAATCAAGAACTTCTGGAATTCAACAATAAAGAAAAGACTGAAGAACATGTCGTCGAACACCTCGCCAAATGCGAGCGATGAATCCTCATACGACCCTAACAAAGAGCATAACAACATGGGAGGAGGGTTTACAACTTGTTCAACAGTACAAGATCAACATCATATTGATAATCATTTTATGCCAATGTTCAATACTTCATCTCCACCATCAATGCAAAACACAGTTTTCAATACTATAATGTCATCATCTAGTGGTGGATTCTTCAACAATAATAGTACTACAGGAACATTCTTCTCACAAAACAATCATGACAACAAAAGTTATTATTTGGAAAAAATGTTTGGGAGTGTAAATGTTAATGGTGCAGAAGGGGTTGAGATGGAAATTTACAATGTTCCTCCTCTAGAGAGTGTTAATAATAGTACTATTACTTCTGAAAATAATACTATAAAAATGGAGAATGCCTGCAATATTGGAGAAGATACTAATTACAATATTAGTAGTTATAACTTTGATGATATAAACAACATTGTTAACAACAATGTTGTTAGTAAGAGAATTGATCAAAATATAGCTGATGATGAGGTGGAGAATTTATTTCATGGAGATTTAACTGTTGCAGATTGGAACTTAGAGGATTTGATGAAAGACGTTTCATCTTTTCCCTTTCTTGATTTTTCAAATTGA 1008 0.3522 MRKPEISGKNNSNNKLRKGLWSPEEDDKLMNYMLNSGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSSNTSPNASDESSYDPNKEHNNMGGGFTTCSTVQDQHHIDNHFMPMFNTSSPPSMQNTVFNTIMSSSSGGFFNNNSTTGTFFSQNNHDNKSYYLEKMFGSVNVNGAEGVEMEIYNVPPLESVNNSTITSENNTIKMENACNIGEDTNYNISSYNFDDINNIVNNNVVSKRIDQNIADDEVENLFHGDLTVADWNLEDLMKDVSSFPFLDFSN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03155 335 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Trre7g03155 335 MobiDBLite consensus disorder prediction 1 20 - -
Trre7g03155 335 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Trre7g03155 335 FunFam MYB transcription factor 15 71 - -
Trre7g03155 335 FunFam Transcription factor MYB46 72 142 - -
Trre7g03155 335 CDD SANT 21 65 IPR001005 -
Trre7g03155 335 MobiDBLite consensus disorder prediction 122 146 - -
Trre7g03155 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Trre7g03155 335 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Trre7g03155 335 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Trre7g03155 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Trre7g03155 335 SMART sant 70 118 IPR001005 -
Trre7g03155 335 SMART sant 17 67 IPR001005 -
Trre7g03155 335 PANTHER MYB DOMAIN PROTEIN 55 11 259 - -
Trre7g03155 335 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Trre7g03155 335 CDD SANT 73 113 IPR001005 -
Trre7g03155 335 Gene3D - 72 146 - -
Trre7g03155 335 Gene3D - 15 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03155 Trre-Chr7 29550390 29553003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03155 1 333 MYB Transcription Factor Family AT3G08500 44.932 8.59e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Trre7g03155 Myb_DNA-binding 9.8e-12 CL0123