Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03151 ATGGCAAGTTTGGATAGAGACCTAAAGAATATGAGGGAATATTTTAGGAGTGGAAAAACAAAGGAAGCTTCATGGAGAGAATCACAGCTAAAAGGATTGCTTAGTTTCCTAATTGAAAAAGAGAATGATATCTTCAAGGCACTCATGCAAGATTTAGGGAAACATCGTATTGAAGCTTTTAGAGATGAGATAGGAACTTTAGTGAAGACCTTAAATCTCGCATTAAAGTCCCTGAAAGATTGGATGTCAAGCAAGAAGGCTCCACTACCAGCAATAGCATTGCTTTCAAGTGCAGAAATTATTCATGAACCTCTTGGTCTTGTCCTCATTATTTCATCTTGGAATTTCCCATTTGGAGTGTCATTGGAGCCACTAATAGGAGCAATAACTGCTGGAAACACAGCAGTGTTAAAACCTTCGGAGTTGTCCCCTTCATGTTCCTCTTTGCTTGCTTCTGGCATTGCAACTTACTTGGACAATAAAGCCATTAAGGTTATTGAAGGGGGGCCAGAGGAATCAGAACAATTGTTACAACAAAGATGGGACAAAATCTTTTTTACAGGTAGCGGACGAGTGGGGCGCATTGTGATGGCTGCAGCTGCAAAACATTTGACCCCGGTAACACTGGAGTTGGGTGGAAAATGCCCTGCTGTTGTGGACTCCCTTACATCTTCTTGGGATTTAGAGGTGACTGTGAAGCGGATTATTGTGGGAAAATATGGAACTTGTGCTGGTCAAGCATGCATAGCAATTGACTATGTCCTTGTGGAAAAGAGTTACTATCCAAAATTGGTTGAATTGATGAAGGTGTGGATCAAGAAAATGTTTGGAGACAACCCAAAACATTCCAACACTATAGCAAGGATAGTTAATAAACAACACTTATATAGATTGAAGAAACTTCTTACTGATAAAAAGGTTAAAGAATCTGTTGTTTATGGTGGCTCAGTGGATGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGGATCCACCACTTGATGCAACAATAATGATAGATGAAGTTTTTGGTCCATTACTTCCAATTATTACCGTTGATAAGATTGAGGACAGTATTGAATTCATAAGCTCTAGGCCTAAGCCTCTAGCCCTTTATGTTTTCTCCAAAAACAAAACACTGCAGAACAGAATGATATCAGAAACATCATCTGGAAGTGTTACATTCAACGACGCAATTCTACAATATGCAGCAGATTCTCTACCATTTGGAGGAGTAGGTGCAAGTGGGTTTGGCATGTACCATGGAAAATTCTCCTTTGACACATTCAGTCACCAGAAGGCAATTGTTAGAAGAAGTTTCTTAACTGATTTTTGGTATAGATATCCACCATGGACAGCAAATAAGTTTCAACTACTTGAGGTCTCTTACAATTATGATTATCTTGGATTGGTCCTTGTTATTCTTGGATTAAAGAGACCTTCGAAACGCCAGATCATACCTTGTTAG 1470 0.3905 MASLDRDLKNMREYFRSGKTKEASWRESQLKGLLSFLIEKENDIFKALMQDLGKHRIEAFRDEIGTLVKTLNLALKSLKDWMSSKKAPLPAIALLSSAEIIHEPLGLVLIISSWNFPFGVSLEPLIGAITAGNTAVLKPSELSPSCSSLLASGIATYLDNKAIKVIEGGPEESEQLLQQRWDKIFFTGSGRVGRIVMAAAAKHLTPVTLELGGKCPAVVDSLTSSWDLEVTVKRIIVGKYGTCAGQACIAIDYVLVEKSYYPKLVELMKVWIKKMFGDNPKHSNTIARIVNKQHLYRLKKLLTDKKVKESVVYGGSVDEENLFIEPTILVDPPLDATIMIDEVFGPLLPIITVDKIEDSIEFISSRPKPLALYVFSKNKTLQNRMISETSSGSVTFNDAILQYAADSLPFGGVGASGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTANKFQLLEVSYNYDYLGLVLVILGLKRPSKRQIIPC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03151 489 FunFam Aldehyde dehydrogenase 12 216 - -
Trre7g03151 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
Trre7g03151 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Trre7g03151 489 SUPERFAMILY ALDH-like 5 453 IPR016161 GO:0016491
Trre7g03151 489 Pfam Aldehyde dehydrogenase family 5 436 IPR015590 GO:0016491
Trre7g03151 489 PIRSF ALDH 2 472 IPR012394 GO:0006081
Trre7g03151 489 PANTHER ALDEHYDE DEHYDROGENASE 3 475 IPR012394 GO:0006081
Trre7g03151 489 FunFam Aldehyde dehydrogenase 213 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03151 Trre-Chr7 29439491 29445677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03151 3 480 Aldehyde Dehydrogenase Gene Family AT4G36250 54.603 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03151 K00128 - gmx:100817701 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g04472 11 56942816 56948697 Trre7g03151 7 29439491 29445677 PCT