Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03143 ATGACAAAACAACAATTGCTCAGTTTACAGCACATATTCCCTTTCCTGCAGTCATTTGGGTGCTTTTTGACACCTGGAATGAATATCCGCCTTGTAGGAGAAGCTAATGATTATGTTGGGAAGATGAACATAACCAAGAGACTTGACATGTCCAGGTTTTCCGCTCGATTGATTCCAACTCTGAAAGGATTTCTGAAAGAACCGAAAGATGCTATACAAAGGAACTTTGTTTGTGGAAAGAATGTAATGATAGAAATGAGCATACATTCTGCATATGTGCAATCAGAGTACCACAGAAGTTCATTTATATTGAGAATCAATATTTTCTCAGCTCATCATATAATTCGGATTCGTACAAAGACCTTAGTGCAAGCAACTTAA 381 0.3727 MTKQQLLSLQHIFPFLQSFGCFLTPGMNIRLVGEANDYVGKMNITKRLDMSRFSARLIPTLKGFLKEPKDAIQRNFVCGKNVMIEMSIHSAYVQSEYHRSSFILRINIFSAHHIIRIRTKTLVQAT 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03143 126 Gene3D - 16 45 IPR036485 GO:0016491
Trre7g03143 126 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 17 42 IPR036485 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03143 Trre-Chr7 29365204 29367040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03143 60 126 Phospholipase D Gene Family (Wang group) AT2G42010 41.791 1.42e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03143 K01115 K00284 gmx:100786241 60.8474