Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03126 ATGGATGGGATGTCAATGCCACCAAGATCATCAACCAATGGTACTACCATGATGATGATGGGTCATAAGATGCATGGCATGATGCATATGACATTCTTCTGGGGAAGAGATGCTTTGATTCTCTTCAATGGTTGGCCTGCTGGTAATACTGCTAATTATCTGTTGGCATTGTTTATGGTTTTCGTCATGTCGGTACTCATTGAGTTACTCTCTCACACCCGCTTCATCGAACCGGATTCCAACAATATGGTGGCCGGAATGGTTCAGACACTTTTGCATATTCTTAGAGTTGGATTATCTTATTTGGTTATGTTGGCACTTATGTCTTTTAATGGTGGTGTGTTCTTGGTTGCTGTTCTTGGTCATGCTCTTGGATTCTTCTTCTGTAGCAGTGCTTTCAAAAAGCCACTTCATGATAAGCATTATGATCTTCCTCCTATGACTTGTTAA 450 0.4111 MDGMSMPPRSSTNGTTMMMMGHKMHGMMHMTFFWGRDALILFNGWPAGNTANYLLALFMVFVMSVLIELLSHTRFIEPDSNNMVAGMVQTLLHILRVGLSYLVMLALMSFNGGVFLVAVLGHALGFFFCSSAFKKPLHDKHYDLPPMTC 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03126 149 Pfam Ctr copper transporter family 81 129 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre7g03126 149 Pfam Ctr copper transporter family 30 74 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre7g03126 149 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 19 136 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03126 Trre-Chr7 29084424 29084873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03126 31 149 Inorganic Solute Cotransporters AT5G59030 47.581 6.24e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03126 K14686 - gmx:100306175 196.823