Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03121 ATGGAACCAGCTCCACCATCATTGGAGCTAGACCTTGACAACCTTAAAGCACTCAAAATCCTAGGCAAAGGTGCCATGGGCACTGTCTTCTTAATCCACCACCCCACCGCCACCTCAACCACCACCACATTCGCGCTCAAAGTCGTCGACAAAACATCCGTCCATGCCAAACTCGACGCCGAACGTCGCGCCCGTTGGGAAATCCAAGTCCTCTCAACTCTCTCCCATCCTTTCCTCCCTTCCATTCTTGGAACATACGAGTCCCCACAATTCTTAGCATGGGCCCTACCTTATTGTCCCGGTGGTGACCTTAATGTCCTTCGTTACCACCAAAACGACCGCGTTTTCTCTCCTTGTGTTATCCGTTTCTATATAGCTGAAATCCTCTGCGCTCTCGACCACCTACATTCCATGGGCATCGCTTACCGTGATTTAAAACCCGAAAATGTCCTCATTCAACATTCCGGCCACGTCACGTTAACCGATTTTGATCTCTCTCGAAAACTTAGCCCAAAAACCGTTACAAATAATAATACAACCGTTGATTCTAATTTACCTTCACATGATAGAAACCTTCCAGAATCTTCTAGAAAACACCGACGGAATTTCTCACGGTGGATCCCTCTATCATCGGAAACTTCTCATCAAATTCAACACAAGATGAATGGTTTGAATTTGAAGAAAGCGAAATCAGCACGAGTTAGTCCGGTGAGTCGACGGAAAATGAGTTTCTCAAACGGTGAACGATCTAACTCGTTTGTTGGAACGGAGGAGTATGTTTCGCCGGAGGTTGTTCGCGGTGACGGTCATGAATTTGCTGTTGATTGGTGGGCGTTAGGGATTCTTATGTACGAAATGATGTACGGTACGACGCCGTTTAAGGGGAAGAATCGGAAGGAAACATTTAAAAATGTTTTGATGAAGTCGCCGGAATTCGTTGGGAAACGATCGGAGTTGACGGATTTGATAGAGAAGTTGTTGGAGAAGGATCCAACGAAGAGATTGGGTTATTCGCGTGGCGCTGTTGAGATTAAAGAGCATGGGTTTTTTAGAGGGGTTAATTGGGAAATGTTGACGGAGGTGGTACGGCCGCCGTTTATTCCGGCAAGAGATGACGGTCACGGGGAATTTCCGTTAGAGAAGTTTTCCAATGGCGGTGTTGATATTAAGGATTATTTTCAGCGGTTGAAAACGCCACCGTCGTTGCATCCTTCGCCGTTAACGTCGCCGTCTCCCAATAAGTTTAAAAAGAAAAATGTTTCGTTAACGGAATTCTGA 1278 0.4617 MEPAPPSLELDLDNLKALKILGKGAMGTVFLIHHPTATSTTTTFALKVVDKTSVHAKLDAERRARWEIQVLSTLSHPFLPSILGTYESPQFLAWALPYCPGGDLNVLRYHQNDRVFSPCVIRFYIAEILCALDHLHSMGIAYRDLKPENVLIQHSGHVTLTDFDLSRKLSPKTVTNNNTTVDSNLPSHDRNLPESSRKHRRNFSRWIPLSSETSHQIQHKMNGLNLKKAKSARVSPVSRRKMSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILMYEMMYGTTPFKGKNRKETFKNVLMKSPEFVGKRSELTDLIEKLLEKDPTKRLGYSRGAVEIKEHGFFRGVNWEMLTEVVRPPFIPARDDGHGEFPLEKFSNGGVDIKDYFQRLKTPPSLHPSPLTSPSPNKFKKKNVSLTEF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03121 425 SMART serkin_6 15 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03121 425 Gene3D Transferase(Phosphotransferase) domain 1 103 176 - -
Trre7g03121 425 FunFam Serine/threonine-protein kinase UCNL 15 102 - -
Trre7g03121 425 ProSiteProfiles AGC-kinase C-terminal domain profile. 351 425 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trre7g03121 425 ProSitePatterns Protein kinases ATP-binding region signature. 21 47 IPR017441 GO:0005524
Trre7g03121 425 MobiDBLite consensus disorder prediction 408 425 - -
Trre7g03121 425 Pfam Protein kinase domain 17 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03121 425 Pfam Protein kinase domain 245 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03121 425 FunFam Serine/threonine-protein kinase OXI1 103 171 - -
Trre7g03121 425 MobiDBLite consensus disorder prediction 398 425 - -
Trre7g03121 425 PANTHER FLIPPASE KINASE 1-RELATED 10 370 - -
Trre7g03121 425 Gene3D Phosphorylase Kinase; domain 1 15 102 - -
Trre7g03121 425 Gene3D Transferase(Phosphotransferase) domain 1 245 369 - -
Trre7g03121 425 ProSiteProfiles Protein kinase domain profile. 15 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03121 425 FunFam Serine/threonine-protein kinase OXI1 248 369 - -
Trre7g03121 425 MobiDBLite consensus disorder prediction 228 249 - -
Trre7g03121 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Trre7g03121 425 MobiDBLite consensus disorder prediction 174 197 - -
Trre7g03121 425 SUPERFAMILY Protein kinase-like (PK-like) 7 368 IPR011009 -
Trre7g03121 425 MobiDBLite consensus disorder prediction 174 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03121 Trre-Chr7 28943812 28945089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03121 10 425 AGC Kinase Gene Family AT3G20830 59.338 1.09e-164 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre7g03121 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03121 - - gmx:100785281 604.364