Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03110 ATGTTACAGTTTATTCTTCTCTTATTGTTTTTAACAATAGTTAATATATTCACTCTACTTTTTTCAGAAAACAGCAATTCATCATCAATTCCAAATTGTGTTGATAAATGGGTGAATAATATCCATGAACAAAATGTGCAAAGTGGCCAAGAAAGTGTTGCACTTGCCAACATTGAACCTCATTTGGAGATGAAATTTGATTCTGAACCGGCGGCTTATGAATTTTATAATGAGTACAGTAAAAGAAATGGATTTGGTATTCGTCGAGAATATTCAAATAAAAGCAGAGTAGATGGAGCTTTGACCTCAAGAAGATTCACATGCTTCAAAGAGGGTAAACGAAGTGTTGACAAAAGACGTACAGGGGAACATAGAGCAGAAACCAGAACGGGATGTCAATCGCGTATGGTTATTTCACTTGATCGAAAGATAGAGAAATACGTGGTTATTGACTTTATAGCTCAACATAACCACCAACTCCAACCACCGGAGCATGTTCATATGATTCGCTCTCATCGGCGCATATCTGAGGCACAAGCAACACAAATTGTCTTGGGAGATGAATCTGGATTAAGACCAAAAGATTTGCAGGAATATATATCCAAGCAAGCTGGTGGAATAGAGACAGTTGGTTTTACAAAAAAATACTAA 651 0.3656 MLQFILLLLFLTIVNIFTLLFSENSNSSSIPNCVDKWVNNIHEQNVQSGQESVALANIEPHLEMKFDSEPAAYEFYNEYSKRNGFGIRREYSNKSRVDGALTSRRFTCFKEGKRSVDKRRTGEHRAETRTGCQSRMVISLDRKIEKYVVIDFIAQHNHQLQPPEHVHMIRSHRRISEAQATQIVLGDESGLRPKDLQEYISKQAGGIETVGFTKKY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03110 216 Pfam FAR1 DNA-binding domain 74 162 IPR004330 -
Trre7g03110 216 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 43 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03110 Trre-Chr7 28733384 28734034 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre7g03110 FAR1 8.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03110 - - tpra:123905213 297.36