Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03093 ATGGCTATCAATCATCATTCAAATAAAGATTTCAAAGTAACAGATGATGAACTTCTTCAATCATTCCTCTACAACAAAATTCACAACAAACCTTTGCCCAATCATATGACCATTCTCGAATACGATTTGTTCGGTACCACAAAGAATCCTTGTGACATTTGGGAAGAGTTTGCAGCTTCACACTTATATAGTGGAAAAGACTTATATTTCTTCAGTACCTTAAAGAAGAAATCGGCCAATAGCACACGCATGGATCGTACTATTGGAACTGGTTCATGGGAAGCTGAAGATAGCGGAAAAAGTATATTCGCTAAAAATACAAACCAACTCCTTGGTATAAAAAAACGCTATCGCTTTGAAAAGAGTAAGACTAAGACTGATCCAGATGGTGGATGGATCTTACACGAATATCGCCTTGACCAATCTTTGATAAGCAATCCTTCGGCCAAAAACTATGTTCTATGCAGATTTAGAAAGAATGCGAAGCTGGATACACAAAATACAGAAACAACATTAAATCAGCAATCCAATTCACACCACAATTCAAGAGCCAAGAATGTTGGAGAAGATGAACAAAGAAAAACCGCTGTTCCTCCACGTGCGGCAACAACCACCATATCTGGCAGTAATACTTTTTTGAGTAAATATACAATTTATGTACCAATAGATGAATCAAATGGTGAACACAATAAGACAAATGTGGTTAATGAAGAGTCTTCATACAAAGAAGAAGGTATAGAAAATATATGGCCAGAAAACACCATCGTTCTTGCACTCGAGGCTACGCCCAAATCTGAGAACAATAGTGAATTTAACAAAGAAGGTGTTGAATGCATTATGAACAAAGAATATGATGGTGGTATCATTAAAAACACAGAAGAAGATGATAGCAAAGAAGAAGAGGGTGATGGCACTATGTCTTGGCCTGAGTATTTTTCACAAGAGTTAATAAACAATAATGAAGCTTGTCTGATGGGAGAGGAAGATGTTATAATGATTTCCAATAATTTTAATAAAGAATTGTTGGAAAGTATGATCAATATTAAGTAA 1050 0.3562 MAINHHSNKDFKVTDDELLQSFLYNKIHNKPLPNHMTILEYDLFGTTKNPCDIWEEFAASHLYSGKDLYFFSTLKKKSANSTRMDRTIGTGSWEAEDSGKSIFAKNTNQLLGIKKRYRFEKSKTKTDPDGGWILHEYRLDQSLISNPSAKNYVLCRFRKNAKLDTQNTETTLNQQSNSHHNSRAKNVGEDEQRKTAVPPRAATTTISGSNTFLSKYTIYVPIDESNGEHNKTNVVNEESSYKEEGIENIWPENTIVLALEATPKSENNSEFNKEGVECIMNKEYDGGIIKNTEEDDSKEEEGDGTMSWPEYFSQELINNNEACLMGEEDVIMISNNFNKELLESMINIK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03093 349 MobiDBLite consensus disorder prediction 167 200 - -
Trre7g03093 349 Pfam No apical meristem (NAM) protein 10 139 IPR003441 GO:0003677|GO:0006355
Trre7g03093 349 PANTHER NAC TRANSCRIPTION FACTOR 56 11 203 - -
Trre7g03093 349 Gene3D NAC domain 14 164 IPR036093 GO:0003677|GO:0006355
Trre7g03093 349 SUPERFAMILY NAC domain 11 158 IPR036093 GO:0003677|GO:0006355
Trre7g03093 349 ProSiteProfiles NAC domain profile. 5 160 IPR003441 GO:0003677|GO:0006355
Trre7g03093 349 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03093 Trre-Chr7 28595102 28599528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03093 11 156 NAC Transcription Factor Family AT5G13180 35.374 3.02e-17 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre7g03093 NAM 4.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03093 - - tpra:123896066 343.584