Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03091 ATGAATACAGAAAGATCAATAGAAGACCAATTCTCCAAGCTACATCCTTCTTTGCCAGAAAACACCAGAATCGGAATAGTTGGTGCCGGTCCTAGTGGCTTATCAGCAGCTTATGCATTAACCAGACTTGGTTATAAGAATGTTACAGTTTTGGAGAAACATCACACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTTTGACTTAGGAGGACAAGTTCTAGCTGCAAGTAGTGCTCCGGTCATCTTTCACTTGGCGAAAGAGACAGGCTCTGCATTAGAAGAAATGGATTCCCATAAGCTCGCGGTTGTTGACCCTTCATCAGGAGAATATCAAGATATTAAAGTTGCCGATGATTACGTATCTGTTATGTCACTTACATTGCAAATACAAGAAAAAGTGAAGAATTGTGGTCGTATCGGTATCCATGCTGTTAGCGACATTGCTTCAGATTTAACTCCAGAGTATCTACAGTGTCATGGACTCAAATCCATTCCTAAATCTGTAGCTTATGGTTACACTGCTTCAGGATATGGATTTGTTCAAGACATGCCTTATGCCTACCTTCATGAATTTACTAGAACATCAATGGCTGGTAAAATTCGACGATTTAAAGGTGGATATACAAGTCTTTGGCAGAAGATTGCTGAATCACTTCCTTTGAGACTTCTCTGTAACACTGAAGTATTGGCAATCAATCGGAACTCAGATAGTGTCATGGTTGATATCAAGAGATTAAACGTAGTTGAAACATTGGAATTTGATAAGATCATAATTTCTGGTTCGTTTCCATTAAAATATGGAAGAATTTACCGATCACCTTCGACTTGCATAGAAAGCGAAAAAGGAGTAATGGATGCAAGTGATCTTGAAAAGGATTTATTCAGCAAAGTCGAGACAAATGACTACTATACTACTGTTTTAAAGATCAAAGGACTTGAACATTTTCCTATTGGATTTTATTATTTTAATAAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCAATGCAGAAATTTTATGCTGACAGTAATATATTCTTGTTCTGGTCCTACGGCAACTCTGTTGATATTAAGGGACCAACTGTCAAGGAGTTTGCAGTGAAGACGGTAGAAACCATGGGAGGAGAAGTCGAGAGTTTCATTCTTCAACGTTGCTTTAAGTATTTTCCTCATGTTAGCAGCCAAGATATGAAAGATGGATTCTATGAAAAGTTGGAATCAGAACTTCAAGGTTCAAGGAATACTTATTATGTTGGTGGGCTTATGGCATTTGAGCTTACAGAGAGGAACTCATCTTATGCAATGGCTCTAGTTTGCAAGAACTTTGCTAATAGCAATGAATTGCCAACATTTCCTTATACTAAGAATTTGTTTCCCTTGCAAACGGAGAGCCAAAAGAAGAACCCTAAAGAATTAGATGAATTGCCAGAAGTACAATTTCCTAATTTGCCTACTTTGAATAGCTACTTAAAGTACTGGGGGACTCATCCAATCACTCAAAATAGGACTCTTTACACATGGATTAATGAAGAAGGGAATCCGGTGTGCCGCAGGACCTATGGAGAACAATATTTTTATTCTTCTTGCATTGCTCATAAGCTCTTGACAAGCCAAAAGCCGGTTATCAAGCCTGGTGACAGAGTTCTCCTGGTATATGTCCCTGGTTTAGATTTTATCGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCTTACCCGTTCCAATTATTCCCCCGGATCCCATGCAAAGAAGTGGACAAGCACTGATGAAAATTGAAAACATTGCCAAGTCATGCGGCATTGTGGCAATTTTGTCAACAATAGCTTATCACTCACCCGTCCGTGCAGGTTCATTGAAAAATTTAATTTCACTAACACGACAAAATGGGAAGTCATCCGCTCGGTGGCCGAATCTTCCATGGTTGCACACTGATACCTGGGTCAAGAATTCCAAGAACATTGTTGTGGAGCATCTTGATGATCAATGTGAACCACAACCTGATGATACATGTTTCTTGCAATTTACCTCAGGATCAACTGGTGATGCTAAAGGTGTCATGATCTCTCATGGTGGAGTAATTCACAATGTGAAATTGATGCAAAGAAGATACAAAAGTACCTCGAAGACTAAACTAGTAAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATCGGGGGACTTTTCACATCGCTTGTTAGCGGTGGAACAGCAATTTTATTTTCACCAATGACGTTTATCAAGAAACCACTCTTATGGCTTGAAATCATCAGCAAGTATCAAGCAACTCATAGTGCCGGTCCTAACTTCGCCTTCGAGTTACTGATTCGAAGATTGGAGGCCGACAAGGATAAGATTCAGAATTTGGACCTTTCATCCTTGGTTTTTCTTATGGTTGCTGCTGAACCGGTGAGACAGAAGACACTGAAAAGATTCATTGAGCTAACCACTCCTCTCGGTTTATCTCAAAAGGTGATGGCTCCAGGATACGGATTGGCAGAAAATTGCGTGTTTGTCAGCTGTGCATTTGGAGAAGGTGAGCCTATCATTGTTGATTGGCAGGGAAGAGTTTGTTGTGGGTATGTTCGTCCAGAGGATACAGATATTGACATTAGAATAGTTGATCCAGACACTTGCGAAGAGCTTCACGTAGATGGAAAGGAGGGAGAAATCTGGATTAGAAGTCGAAGTGCAGGAGTAGGATACTGGGGAAGGGAAGAATTGAGTAAGAAAACATTCATGAACGAACTTGCTAATCGTCCCGGAAGTAACTACACGAGAACTGGAGACTTGGGACGAATAATAGATCAGAAGCTATTCATCACTGGAAGAATCAAAGATCTTATCATTGTTGCTGGAAGAAACATATACTCTTCTGATGTGGAAAAGACGATTGAAACTTCATCTGAATTTCTTCGTCCCGGATGCTGTGCTGTCATTGGTGTCCCTGAGGAAATTCTATCAGCAAAGGGGATTTCCATTCCTGATGGTTCTGATCAGGTTGCCTTGGTTGTGATTGCAGAAGTAAGGGATGGTAAACCAGTTAGCAAAGATGTGATTGAGAACATTAAGGCGCGTGTGGCAGAAGAACATGGAGTCAGTCTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAGATCAAGAGATTTGAATGTATCAAACAATTTACAGATGAGACCCTTAACTTGGTACCATTAGGTACAAAACCTATGTTGACAAAGAAATCATTGGTATGGTCATTTACTACTGCGGCCACATGCAGAGAAGAAAAACCGGTCCGACTCCAGTTAGTAAAACGTTCACCTGTACCTAGTAAAAGGATCAACAAAAGCGACATCGTAGAGTTTTTGAAAGTGCTTATTTCTGACCAGACTGGAGTACCAATCAACGACGTCTCAGTCACAGACAACCTGACATCCTATGGAATTGACTCAATTGGGGTGGTTAAAGCAACTCAAAAACTCTCGGATTTTCTAGGCACACCAGTTGCAGCAATAGATGTTTTCACTGCATCATGCATTCTAGAATTGGCTACCTTCTCTGAGGATCTTCTATCAAAGACCCGGCCTCAGCTAGTGAGAAGTGTACCGATACCTACTAAAAGGGTAAGTAAAAATGACATTGTAAAGTTCTTGAAAGGGCTTATTTCCGAACAGACTGGAGTCGCAATCAACAAGATTTCAGTCACAGACAACCTGACATCCTATGGAATCGACTCAGTTGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTTGGAACACCAGTTGCAGCTATTGATGTTTTCACTGCATCCTGCATTACAGAATTGGCTAACTTTTCTGAGGATCTTCTGTCAAAGAATCAGCCTCAGCTTCCAAGCAATCCGAACGATGTTCCAGAGGCGGATATTGATTGTACTGAATCGGCTGTTGAGGTATCAAAGTCTCGCCAATGGGGTATCCGCTTACTTCAATTCCTGGCTCTTATTTATATCTCTATAATGCTTGCCTGGCCTGCTTATCTATCCATCACTGCTTTCTTAAATTCCAGCATGTGTGTGAGTAAATCAGTAGCTGGAGTTCCCTGGTTAAATTATATAATTTCGCTGATTTTTGCTCCTCTTGCTTGGATTCTTTGCATTTCTTCTACTTGTGTTTGCATTTCATTGTTCGGAAGTTCTTTACTGGGGACAAACTGTGAACTTGCCTCTGATATCTCTATCTATTCAATGGATTTTGTCAAGTGGTGGGCCCTATATAAAGCTCAAGAAATTTCCTCTAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAAATTCTGGTTTGAGATGTTTGGTGCAAGAATTGGATCCTCAGTTCTACTTGATACGGTTGACATCACAGACCCGACTTTGGTATCAATAGGTGATGAAGTTGTCATTGCGGAAGGTGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGAATTCTAAGTCTTCACCCCATTAAGATTGGAAAATGTTCTTCTATTGGACCTTATGCTGTTGTTCAAAAAGGATGTGTTATTGGTGAAAGTGCTCAAGTACAGGCCTTGCAAAAGGTTGGAGGAGATCAGCATGTGCTATTTCCGGATAAGGTTAATAATATTGATAAGAATGCGGATCTTCCTATTATTAACAGCAAAACTCAATATGATGCCATCTACCACTTTATCGGTATCTATCTTGTTGGCTTTCTCAGCTCCCTTGCTGCAGCCATTGCATACTTCTTATATATCAAATTCTCCAAGCAACCTCCATCACTCCAACATTTTTCATTTGTTTGCATATGTGGTGCTTTTCACTGGATCCCGTTTACCGTCATTGCATATGCTACCATGTTTTCTGATGTCCCATCAAATCCTATCACCTTTGCCATGACATTTACCAGCGCTTACTTGCTTCATGGTCTCGTACTCATCACTCTCACCGCTGTTTTTGCTCGTCTCCTCATATGTAATCAAAACAAAACCGAATTCAAAACCTGGCTTCAACGTCAAATGAATATTTCCTGCCACCTTAGATGTGCAAAAGTTCTCTCAGGAACAGAAGCCTTCTGCATATACTTACGCCTTTTGGGCGCAAAAATTGGCAAACATTGTTCCATTAGAGCCATCAACCCAGTTTCAAATCCAGAGTTAATGTCAATCGGTGCCGGTGTCCATCTCGGAGACTTTAGCAAAATAATTACAGGGTTTCATTCTTCCAACGGATATACTTGTGGAAAAATCGAAGTTCAAGATAACTCGGTCATTGGAAGTCAAAGCCTAATTCTCCCAGGCTCTCTCATCCAAAAGAATGTAATCCTTGGTGCACTTTCAATAGCTCCAATGAACTCTATACTCCAAGAGGGTGGTTTATACATAGGATCACAATCCCATACAGCTAATTTAACTGCACCATTGCACAAACAAGACTCGCAAAAAGTAACCTTGACATTAACAAGAACATGGCATCAAACCTTCACATCACTCTTCATTCAGCCATTTCTACAAACAGCTTCACCGCATATCTTATTGGGTTTATCAATTTATCTTCCTTTGAACTTAATTTTCCACCTCAAGAATACCAAAAAAGTTCCAATCTTTTGGCTACTTCCATTGTTTTGGATTCTCTCAGGAATTATAGCTGCATTAACATGTGTTATAGCCAAATGGGTCCTTATTGGAAGAAAGAAAAGAGGTGAAAAAATTCCTATATGGAGTAAAAGTATAACCTTTGATAGTACATGGCAAGCAATAAGAACATTAATTGGTGATTATTTCATGGAAATGACATGTGGGTCATTTATGTTTGTAATATGGATGAAAATGATGGGTGTTGATGTAAACATAGGTGGTGATGATGATGTTTATGTTGATAGCATGGGAACATTGTTGAATCCTGAGATGGTGAAAATTGAAAGAGGTGGTTGTGTTGGAAAAGAAGCATTGTTTTTTGGACATATATATGAAGGTGATGAAGGTGGAATGGTTAAGTTTGGAGAGATTAAGATTGGTGAAAATGGGTTTGTTGGAAGTAGAGCTGTTGTTATGCCTGGTGTTGTTTTGGAGAATGAGGCTAATGTTGGTGCTTTGTCACTTGTAATGAAAGAAGAAATTGTTAGATCAAGGTGA 6162 0.3994 MNTERSIEDQFSKLHPSLPENTRIGIVGAGPSGLSAAYALTRLGYKNVTVLEKHHTVGGMCESVEIEGKVFDLGGQVLAASSAPVIFHLAKETGSALEEMDSHKLAVVDPSSGEYQDIKVADDYVSVMSLTLQIQEKVKNCGRIGIHAVSDIASDLTPEYLQCHGLKSIPKSVAYGYTASGYGFVQDMPYAYLHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPLRLLCNTEVLAINRNSDSVMVDIKRLNVVETLEFDKIIISGSFPLKYGRIYRSPSTCIESEKGVMDASDLEKDLFSKVETNDYYTTVLKIKGLEHFPIGFYYFNKYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSVDIKGPTVKEFAVKTVETMGGEVESFILQRCFKYFPHVSSQDMKDGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALVCKNFANSNELPTFPYTKNLFPLQTESQKKNPKELDELPEVQFPNLPTLNSYLKYWGTHPITQNRTLYTWINEEGNPVCRRTYGEQYFYSSCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPIIPPDPMQRSGQALMKIENIAKSCGIVAILSTIAYHSPVRAGSLKNLISLTRQNGKSSARWPNLPWLHTDTWVKNSKNIVVEHLDDQCEPQPDDTCFLQFTSGSTGDAKGVMISHGGVIHNVKLMQRRYKSTSKTKLVSWLPQYHDMGLIGGLFTSLVSGGTAILFSPMTFIKKPLLWLEIISKYQATHSAGPNFAFELLIRRLEADKDKIQNLDLSSLVFLMVAAEPVRQKTLKRFIELTTPLGLSQKVMAPGYGLAENCVFVSCAFGEGEPIIVDWQGRVCCGYVRPEDTDIDIRIVDPDTCEELHVDGKEGEIWIRSRSAGVGYWGREELSKKTFMNELANRPGSNYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSSDVEKTIETSSEFLRPGCCAVIGVPEEILSAKGISIPDGSDQVALVVIAEVRDGKPVSKDVIENIKARVAEEHGVSLASVKLIKPRTISKTTSGKIKRFECIKQFTDETLNLVPLGTKPMLTKKSLVWSFTTAATCREEKPVRLQLVKRSPVPSKRINKSDIVEFLKVLISDQTGVPINDVSVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCILELATFSEDLLSKTRPQLVRSVPIPTKRVSKNDIVKFLKGLISEQTGVAINKISVTDNLTSYGIDSVGVVKATQKLSDFLGTPVAAIDVFTASCITELANFSEDLLSKNQPQLPSNPNDVPEADIDCTESAVEVSKSRQWGIRLLQFLALIYISIMLAWPAYLSITAFLNSSMCVSKSVAGVPWLNYIISLIFAPLAWILCISSTCVCISLFGSSLLGTNCELASDISIYSMDFVKWWALYKAQEISSKVLATHLRGTVFLKFWFEMFGARIGSSVLLDTVDITDPTLVSIGDEVVIAEGVLVQSHEVKNGILSLHPIKIGKCSSIGPYAVVQKGCVIGESAQVQALQKVGGDQHVLFPDKVNNIDKNADLPIINSKTQYDAIYHFIGIYLVGFLSSLAAAIAYFLYIKFSKQPPSLQHFSFVCICGAFHWIPFTVIAYATMFSDVPSNPITFAMTFTSAYLLHGLVLITLTAVFARLLICNQNKTEFKTWLQRQMNISCHLRCAKVLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGAGVHLGDFSKIITGFHSSNGYTCGKIEVQDNSVIGSQSLILPGSLIQKNVILGALSIAPMNSILQEGGLYIGSQSHTANLTAPLHKQDSQKVTLTLTRTWHQTFTSLFIQPFLQTASPHILLGLSIYLPLNLIFHLKNTKKVPIFWLLPLFWILSGIIAALTCVIAKWVLIGRKKRGEKIPIWSKSITFDSTWQAIRTLIGDYFMEMTCGSFMFVIWMKMMGVDVNIGGDDDVYVDSMGTLLNPEMVKIERGGCVGKEALFFGHIYEGDEGGMVKFGEIKIGENGFVGSRAVVMPGVVLENEANVGALSLVMKEEIVRSR 2053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03091 2053 CDD FAAL 508 1071 IPR040097 GO:0008610
Trre7g03091 2053 Gene3D Hexapeptide repeat proteins 1429 1546 - -
Trre7g03091 2053 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 132 1213 - -
Trre7g03091 2053 Pfam Phosphopantetheine attachment site 1224 1288 IPR009081 -
Trre7g03091 2053 Pfam Phosphopantetheine attachment site 1130 1192 IPR009081 -
Trre7g03091 2053 Gene3D - 1211 1291 IPR036736 -
Trre7g03091 2053 Gene3D - 1116 1196 IPR036736 -
Trre7g03091 2053 Gene3D - 478 951 IPR042099 -
Trre7g03091 2053 SUPERFAMILY Trimeric LpxA-like enzymes 1889 2046 IPR011004 -
Trre7g03091 2053 Gene3D - 23 445 IPR036188 -
Trre7g03091 2053 ProSiteProfiles Carrier protein (CP) domain profile. 1216 1293 IPR009081 -
Trre7g03091 2053 SUPERFAMILY ACP-like 1216 1307 IPR036736 -
Trre7g03091 2053 Gene3D - 952 1078 IPR045851 -
Trre7g03091 2053 SUPERFAMILY FAD/NAD(P)-binding domain 20 271 IPR036188 -
Trre7g03091 2053 SUPERFAMILY ACP-like 1122 1204 IPR036736 -
Trre7g03091 2053 Gene3D Hexapeptide repeat proteins 1694 1834 - -
Trre7g03091 2053 ProSitePatterns Phosphopantetheine attachment site. 1248 1263 IPR006162 -
Trre7g03091 2053 Pfam AMP-binding enzyme 521 957 IPR000873 -
Trre7g03091 2053 Gene3D Hexapeptide repeat proteins 1924 2050 - -
Trre7g03091 2053 Gene3D - 302 395 - -
Trre7g03091 2053 PRINTS Adrenodoxin reductase family signature 23 45 - -
Trre7g03091 2053 PRINTS Adrenodoxin reductase family signature 47 60 - -
Trre7g03091 2053 ProSiteProfiles Carrier protein (CP) domain profile. 1124 1198 IPR009081 -
Trre7g03091 2053 SUPERFAMILY Trimeric LpxA-like enzymes 1443 1541 IPR011004 -
Trre7g03091 2053 Gene3D - 94 202 - -
Trre7g03091 2053 ProSitePatterns Phosphopantetheine attachment site. 1153 1168 IPR006162 -
Trre7g03091 2053 SUPERFAMILY Trimeric LpxA-like enzymes 1706 1792 IPR011004 -
Trre7g03091 2053 SMART Phosphopantetheine attachment site 1127 1198 IPR020806 GO:0031177
Trre7g03091 2053 SMART Phosphopantetheine attachment site 1222 1293 IPR020806 GO:0031177
Trre7g03091 2053 ProSitePatterns Putative AMP-binding domain signature. 679 690 IPR020845 -
Trre7g03091 2053 SUPERFAMILY Acetyl-CoA synthetase-like 493 1076 - -
Trre7g03091 2053 Pfam NAD(P)-binding Rossmann-like domain 26 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03091 Trre-Chr7 28569467 28576689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03091 644 1072 Monolignol Biosynthesis Gene Families AT1G20480 26.000 1.69e-21 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03091 - - tpra:123914735 3908.61