Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03038 ATGGGGTTCTCAGCAAGGCATTTTTTAATCTATGGTTTGAATATTCTATTTGAACTTGTGGTTTTAATATCATATTTTTGGTGTCAAGTTTATAGTCTTGGTTCAATGTCATCCATTGCAGTTTCATATGGTGAAAAAGGTTCAGTTTTTTGTGGTTTGAAATCAGATGGATCTCATACTGTAACCTGTTATGGATCTAACTCAGCCATAATCTATGAAACACCAACACATTTCTCATTTCTTGGCTTAACAGCTGGTGATGGATTTGTTTGTGGCCTTCTAATGGATTCAAATCAACCTTACTGTTGGGGTAACAGTGGCTACATTGAAATGGGTGTGCCTCAACCTATGATTAAAAAAGCTCAGTACTTAGAAATTAGTGCTGGTGATTACCATGTATGTGGATTAAGAAAACCTTGGAAAGAAAAAAATGTTTCTTTAGTTGATTGTTGGGGCTATAACATGACCAAAAGTTACATTTTTGATGGAATGATTCAATCAATCTCAGCCGGTTCTGTGTTTAACTGTGGATTGTTTTCGAACAACGGGAGTGTTTTCTGTTGGGGCGATGAGACTAGTAGCAAGGTTATTAGTTTGACTCCTTTGAAAATGAAGTTCAGAAAAATTTCTGCTGGTGGATATCATGTGTGTGGAATCTTAGAAGGGGTAAATTCTAGAACTTTTTGTTGGGGGAGAAGCTTGGACAATGAGGAACAAATTTCAGTAACACATGCAGGTCATGGAAATGTAGATTTGGCTCCAAATGATCCTATGATTTCTATAGTAGGAGGAAGGTTTCATGCTTGTGGAATAAAAAGCTATGATAATGGTGTTATTTGTTGGGGATTTATGATCAAATCAAGCACTTCAGCTCCTAGTGAGATTAAGGTTTATGAGATTGCAGCTGGTGATTATTTTACTTGTGGAGTACTTGCTGGGAAAAAATCTCTTGTGCCTTTTTGTTGGGGTGTTGGTTTCCCTACTTCTCTTCCTTTAGCTGTCGCGCCGGGAATATGCAAGCCTTATCCATGTTCTTATGGTTTCTATGAATTTGATCAAAAGGGTCTTTGCAAGTTTCCAAATTCTGGTGTTTGCATGCCATGCAGTGGTGATTGTCCTGTTGAAATGTATCAGAAAAGTGTATGCAATTTGGCTTCTGATAGAATGTGTGAATATAACTGTTCTGCTTGTTCTTCACATGAATGTTTCTTACACTGCTTCTCTTCATATTCTAATGTCGGCAATGAGAAGAGAAATGAGAAAATTTGGGCTTTGCAGTTACCAGTGATTATTGCAGAGATTGGTTTTGTAATTTTCATAGTTAGTATTGCATCGTTAACCTCGGTTTTGTATGTTCGCCACAGGCTAAGAGATTGTGAGTGTTCAGCAAGATTAAAAAAGGCGAAGAGACTTAATCGAAGTTCTTCCCTTCAAAATGAGAACCGCAAGATCCGTCCGGAAATGGAGGAGTTCAAGCTTAGGAAGGCTCAAAGGTTTACCTATGAAGAACTTGAAACTGCAACAAATGGATTCAAAGAAGAATCAATAGTAGGAAAAGGAAGTTTTTCTTGTGTATTCAGAGGAGTTTTAAAAGATGGAACAGTTGTAGCTGTTAAAAGGGCTATAGTATCTCTTTCTCCTCCCAACAACATGCACAAGAATAACAAAGAATTTCACACTGAACTTGACTTACTCTCGAGATTAAATCATGCTCATTTGCTCAACCTGCTAGGCTATTGCGAAGAAGGCGGAGAAAGACTTCTTGTTTATGAGTTCATGGCTCATGGATCTTTGTATCAACACCTTCATGGACCAAATCAAGTGTTGAAACAGGAATTAAACTGGATAAGGAGAGTAACAATAGCAGTTCAAGCGGCTCGTGGGATCGAATATTTACACGGCTACGCTTGTCCACCGGTTATTCATAGAGACATTAAGTCCTCAAACATACTCATTGATGAAGAACACAATGCAAGAGTTTCTGATTTTGGTTTATCATTATTAGGTCCTGTAGATAGTAATTCTCCACTTGCCGAGCTACCGGCCGGAACTCTCGGTTACCTTGATCCTGAATACTATAGACTCCATTACCTTACAACAAAATCTGATGTCTATAGTTTTGGTGTTCTACTCTTGGAAATTCTAAGTGGTAGAAAAGCTATTGACATGATGCAATATGAAGAAGGAAATAACATAGTTGAATGGGCAGTGCCTTTGATAAAATCAGGTGATATAGCTGCAATTTTGGATCCAATTCTTAAACCTCCTCGCGAAATCGACGCGTTGAAAAAGATAGCTAATGTAGCTTGTAAATGTGTGAGAATGAGAGGTAAAGAGAGACCTTCAATGGACAAAGTAACAACTTCTTTAGAAAGATCTCTTGCAGTGTTAATGGGAAGTCCATGTATCGATCAACCGATTTTACCTTCTGAAGTTGTGTTAGGAAGTAATAGATTGCATAGAAAATCATCTCAAATGTCTTCAAATAGGTCAGTTTCTGAAAATGAGGATCAAAGATTTGAGCTTAGAGCACCTTCATGGATAACATTTCCTAGTGTTGCATCTTCTCTAAGAAGAAAGTCATCAATGTCAGAAGCAGATGTTGATGGAAAAATTGCAGATGTGAAGATTAATATTGGAAATGTTGGAGGGAGTAGTGATGTGTTGAGAAGTTTAGAGGAAGAGATTGGACCTGCTTCTCCACAAGAGAGGTTGTTTTTGGAACACAACTTCTAA 2736 0.3779 MGFSARHFLIYGLNILFELVVLISYFWCQVYSLGSMSSIAVSYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYETPTHFSFLGLTAGDGFVCGLLMDSNQPYCWGNSGYIEMGVPQPMIKKAQYLEISAGDYHVCGLRKPWKEKNVSLVDCWGYNMTKSYIFDGMIQSISAGSVFNCGLFSNNGSVFCWGDETSSKVISLTPLKMKFRKISAGGYHVCGILEGVNSRTFCWGRSLDNEEQISVTHAGHGNVDLAPNDPMISIVGGRFHACGIKSYDNGVICWGFMIKSSTSAPSEIKVYEIAAGDYFTCGVLAGKKSLVPFCWGVGFPTSLPLAVAPGICKPYPCSYGFYEFDQKGLCKFPNSGVCMPCSGDCPVEMYQKSVCNLASDRMCEYNCSACSSHECFLHCFSSYSNVGNEKRNEKIWALQLPVIIAEIGFVIFIVSIASLTSVLYVRHRLRDCECSARLKKAKRLNRSSSLQNENRKIRPEMEEFKLRKAQRFTYEELETATNGFKEESIVGKGSFSCVFRGVLKDGTVVAVKRAIVSLSPPNNMHKNNKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLYQHLHGPNQVLKQELNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPVDSNSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMMQYEEGNNIVEWAVPLIKSGDIAAILDPILKPPREIDALKKIANVACKCVRMRGKERPSMDKVTTSLERSLAVLMGSPCIDQPILPSEVVLGSNRLHRKSSQMSSNRSVSENEDQRFELRAPSWITFPSVASSLRRKSSMSEADVDGKIADVKINIGNVGGSSDVLRSLEEEIGPASPQERLFLEHNF 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03038 911 FunFam Receptor protein kinase CRINKLY4 593 797 - -
Trre7g03038 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Trre7g03038 911 Pfam Protein tyrosine and serine/threonine kinase 514 789 IPR001245 GO:0004672|GO:0006468
Trre7g03038 911 SMART serkin_6 511 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03038 911 FunFam serine/threonine-protein kinase-like protein CCR1 481 592 - -
Trre7g03038 911 SUPERFAMILY Protein kinase-like (PK-like) 489 790 IPR011009 -
Trre7g03038 911 SUPERFAMILY RCC1/BLIP-II 32 283 IPR009091 -
Trre7g03038 911 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 17 911 - -
Trre7g03038 911 Gene3D - 83 340 IPR009091 -
Trre7g03038 911 Gene3D Transferase(Phosphotransferase) domain 1 593 797 - -
Trre7g03038 911 FunFam Serine/threonine-protein kinase-like protein CR4 32 197 - -
Trre7g03038 911 Gene3D Phosphorylase Kinase; domain 1 481 592 - -
Trre7g03038 911 ProSiteProfiles Protein kinase domain profile. 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g03038 911 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03038 Trre-Chr7 27576035 27578770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03038 15 911 Receptor kinase-like Gene Family AT3G59420 65.491 0.0 1181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Trre7g03038 PK_Tyr_Ser-Thr 7.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03038 - - gmx:100797455 1479.15