Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03007 ATGGTTAGATGTCAGCTTGATGACCCACACATAGGTGGTAATATAACGAGATTGGAAACTTTATATTCATCTAATCCATCAAGATTTAATTGCTTGTACAGTTTGATACAAGTAGAGATTGGAAGTAAAACTGCTAAATCATCATCAAGTTGTACCAATGGACTTCTTTTGCTGACAAGAGCAATGGATTTCTTGGTGGCTTTGTTCCGAAACTTGATTGAGCATGATGATTGGCCAATGTCACAAGCCTGTACAGATGCATACAACAAGACTCTGAAGAAGTTGCACGGCTGGCTTGCTAGTTCAAGCTTCACTGTAGCTATGAAGCTTGCTCCAGACAGGAAGAAGTTCATGGAGGTGATAGGAGGCACTGGTGATATCAATGCTGACACAGAGAAATTTTGCACAGCCTTCTCTCCTCTCCTTGTACAGAATCACAAATTTCTGGCGCGATGTTCGCTTATTGGACCAGGGGGTTTGAAATTCATCAGTGAAATGGTACAGTTAAAAGCTGTGGGGCCTGTTGCTGTTCTCGGAGGGTTGCTTCAAATTGTAATATTCATGTTCCTTTGTGGAATTCTTGCCATGTTATGTGGAGGAAAATTGTCTGAGGGTGTTTTTGTTGGTTCCTTTCTGTCAATGTCATCAACAACAGTGGATTGTGCAGTGGGTCTATTATTTGCTTTGCTCCCAGTCTTGGGTGGTAACAGTGGTCTTTTACAAGGGATTATTTCAATGGGTAAACTATTGCAAAAGAGATCTAAAGGACGATCTTGCAGTGATAGAATTGTAGTCAGGTACTGGCGGAAGGAACAGAAAGCGAGAACTTGTGTTGCTCCACTTGAAAGACTTAAGCTGGAATATATAGTTCGTGGCGAGAAGAAGAATATCTTTGAGCTTATTAAATCAATTGCTACTTCTCAAGGGTTGAGGGGTTTTTGGAAGGGGAACCTTCTTAATATTCCGCGAACAGCTCCGTTCAAAGCTGTTACTTTAGTGCTTACGATACATATAGAAAGAAGATTCTCTGGGAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGGACACTGCTACTATTATTTCCCTGCCACTCGACACTGTATGTGGTAATTTCCATGACTTCCGAGGTGAGGGAGAATCTATAGTAAGCTCTCATGAGGTTGAGTCAGCTATTCCTTTAATAGCTTGCAACAAAGAAGAGAATGAAAGACAAATTGAAATTGAATCCCTCGTTCTTAATATTGCACACTCTATCCTCTCCCCCAATGATGAATAG 1296 0.412 MVRCQLDDPHIGGNITRLETLYSSNPSRFNCLYSLIQVEIGSKTAKSSSSCTNGLLLLTRAMDFLVALFRNLIEHDDWPMSQACTDAYNKTLKKLHGWLASSSFTVAMKLAPDRKKFMEVIGGTGDINADTEKFCTAFSPLLVQNHKFLARCSLIGPGGLKFISEMVQLKAVGPVAVLGGLLQIVIFMFLCGILAMLCGGKLSEGVFVGSFLSMSSTTVDCAVGLLFALLPVLGGNSGLLQGIISMGKLLQKRSKGRSCSDRIVVRYWRKEQKARTCVAPLERLKLEYIVRGEKKNIFELIKSIATSQGLRGFWKGNLLNIPRTAPFKAVTLVLTIHIERRFSGNEETTNFERFIAGAAAGDTATIISLPLDTVCGNFHDFRGEGESIVSSHEVESAIPLIACNKEENERQIEIESLVLNIAHSILSPNDE 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03007 431 Gene3D Glycolipid transfer protein 9 156 IPR036497 -
Trre7g03007 431 ProSiteProfiles Solute carrier (Solcar) repeat profile. 261 341 IPR018108 -
Trre7g03007 431 SUPERFAMILY Mitochondrial carrier 275 374 IPR023395 -
Trre7g03007 431 Pfam Glycolipid transfer protein (GLTP) 11 122 IPR014830 GO:0005737|GO:0120009|GO:0120013
Trre7g03007 431 SUPERFAMILY Glycolipid transfer protein, GLTP 11 151 IPR036497 -
Trre7g03007 431 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 11 148 IPR014830 GO:0005737|GO:0120009|GO:0120013
Trre7g03007 431 Gene3D Mitochondrial carrier domain 273 376 IPR023395 -
Trre7g03007 431 Pfam Mitochondrial carrier protein 274 343 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03007 Trre-Chr7 27238436 27242583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03007 148 250 Antiporters AT5G51710 56.209 9.56e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g03007 - - psat:127130509 257.684