Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g03000 ATGCCTAGCATGGCTTCCCCTCTCCAACTTCCACTTTATTCTACTTGTGGTAAAATTCCTTCTCTTACTGCTCCTCAAGCCATTTCTATTAGAAGATTTGTTCTTAAAGTGAAGTGCTCAGAGACAACGAAATGCACTGCTAATGATAATGATAATGCTGTGTTTCATACCAATTCACGTAGAGACTTTCTTGGATTAACATTAGGAGTCTCTACACTCTTTATCCATTCATTTGATGCTGCCAATGGAGCTGGTTTGCCACCGGAAGAAAAACCAAAATTATGCGACGACACTTGTGAGAAAGAGCTTGAAAATGTACCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTATAGTTGGGCAAGGCCCTAGTCCACCAGTTGGATTTCAGGTGGCTGCTAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGCCAGCTTTACATTTTTCGCGTTGGATCGGGTCAGGTTATAAAAGGACTTGATGAAGGTCTTTTGAGCATGAAAGTAGGAGGGAAACGTCGGCTGTACATACCTGGACCATTGGCTTTCCCAAAAGGCCTTAACTCTGCTCCAGGAAGACCAAGAGTGGCTCCAAACAGTCCAGTTGTATTTGATGTAAGTTTGGAATATGTACCAGGACTTGAAGTGGATGACGAATAA 693 0.4141 MPSMASPLQLPLYSTCGKIPSLTAPQAISIRRFVLKVKCSETTKCTANDNDNAVFHTNSRRDFLGLTLGVSTLFIHSFDAANGAGLPPEEKPKLCDDTCEKELENVPMVTTESGLQYKDIIVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGPLAFPKGLNSAPGRPRVAPNSPVVFDVSLEYVPGLEVDDE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g03000 230 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 131 223 IPR001179 GO:0003755
Trre7g03000 230 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 84 223 - -
Trre7g03000 230 Gene3D - 103 220 IPR046357 GO:0003755
Trre7g03000 230 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 131 219 IPR001179 GO:0003755
Trre7g03000 230 FunFam Peptidylprolyl isomerase 103 221 - -
Trre7g03000 230 SUPERFAMILY FKBP-like 96 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g03000 Trre-Chr7 27150643 27153072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g03000 112 219 Calmodulin-binding Proteins AT3G25230 35.780 1.04e-11 62.0