Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02996 ATGGCTCACAAAGGCAACAACAACAAGGAAATAGAAGAAGATGAACGAACGTTTCGACGCTTGAAGAGAGAACAGATCAAAGCCAATGAAAATGTTGCGGAGGAGTTTGACTCTTCTAGTGGCAGAATTAATATTTGTTCCGAGTTCCTCAAACTCAAGTCTCTCATCAATGAGAAAAAGGATGATTTGATGAACATTGATTCTGACAGGTTTTATTCAATCCTTCACGAGTTCAACAAGTTACATGAACAAGTCATGAGACCTCGAGAGCATGTTGTTGACGCTGAAGCACTTCTCGATCTCACTCACACTTTGGCCGAATCCGTTAAGTCTCAGGTCAATGAAGGTGTTACTCCTTCTCAGTTTGTTTCTTCTTTGCTCAAACACTATGCCCACCCACCCAACACTTCAATCGACTGGAATAACCTCGGAATTGCTGTTTCCCCCATTTTCCTCACGGCTCATGGCTCTTCTACCATGCTTGGTACCATGGAAAATAAGTTGAAACAACACAAAATGTACGTGTCTAGAAAGCGAGCTCCTCTCACCACTACAACTTCTAGGCCGGAACAACTGGATGATGTTGTTGGAGGGGAAAAAACAGACACTGACAAAAACATGTTAACCATGTTTAACATATTAAGGGAAAAGAAAAAGGTCCAACTTGAACACCTGATTTTGAACAGATTTTCTTTTGGTCAGACAGTGGAAAACTTGTTTGCCCTTTCATTTTTAGTGAAAGATGGTCGTGCTGAGATCATTATGGACAAAAATCATTCGCACTATGTTTCACCAAAAAATGCTCCGACTGCTAACTCTGTAATGTCAAAAGAAGTTTCTTACACTCATTTTGTCTTCAGATATGATTTCAATGACTGGAAGATAATGAAGGATATTGTGGCCGAGGGCGACGAGTTAATGCCACAAAGGATTCAATATAACAACGTGGAGGAAGTTATTGTGGAGGAATCGCCTGAATGCAATGATGAAAATGCTTCTAGTGCTACTGCAATCCGAAGGTGTAGGCGTAAACTTCCTTAA 1041 0.4073 MAHKGNNNKEIEEDERTFRRLKREQIKANENVAEEFDSSSGRINICSEFLKLKSLINEKKDDLMNIDSDRFYSILHEFNKLHEQVMRPREHVVDAEALLDLTHTLAESVKSQVNEGVTPSQFVSSLLKHYAHPPNTSIDWNNLGIAVSPIFLTAHGSSTMLGTMENKLKQHKMYVSRKRAPLTTTTSRPEQLDDVVGGEKTDTDKNMLTMFNILREKKKVQLEHLILNRFSFGQTVENLFALSFLVKDGRAEIIMDKNHSHYVSPKNAPTANSVMSKEVSYTHFVFRYDFNDWKIMKDIVAEGDELMPQRIQYNNVEEVIVEESPECNDENASSATAIRRCRRKLP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02996 346 Coils Coil 4 31 - -
Trre7g02996 346 MobiDBLite consensus disorder prediction 177 199 - -
Trre7g02996 346 Pfam Nse4 C-terminal 220 301 IPR014854 -
Trre7g02996 346 PANTHER UNCHARACTERIZED 15 341 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02996 Trre-Chr7 27117447 27118586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02996 47 310 Non-SMC Element family AT1G51130 53.846 1.21e-98 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02996 K22825 - gmx:100792117 394.815