Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02990 ATGACTTTTTGTCATAATCATTATCTGCAGAAAATCCCGAAGAAGATTGTTATGAATTTGGGTGAAGAGTTGTGGAAAAATGCTTTGATTTTTCTGATAGGCTCTTCTGGTGAGAAGTGGCAAGTGAGTATCTTGAAGAAAGAAAATAACATATATCTGCAAAATATTAGTTGGCAAAAATTTCTGAAAGACAACTCTGTGTTGCATGAAGAGCTCTTGCTTTTCACGTATAAGGCTGAAAACAGGTTCCAGGTTCAAATTTTTGGTATGAATGGATTAGAGAGACCATGCTTCCAGAAAGAACAAGAAGTTGCAGCCCCAATTGTGCCCGAGACAATGACCGGTAGCCAACAAAAAACCCCTGTTCTTGATAGCGTATGTGTCAAGGAAGAAAACGAAGAAGCTGTAGCAACAGTGGTGGTTAAGAGAAAGAGGGGTAGACCAAGGAAAAATCCTCCTCCTGAGAGATGCGTCAAGCAAAAGGAAGTAGAAGCTGAAGCTGCAGTAACAATGGTGGCCAAAGGAATGCAGAATAGACCAAGAACAAATGCTTCTCCTGAGAGAGTATGTGTGAAGAAAAAAGAAACAGAATCTGCGGCAAAAACGGTGGCCAAAGGAATGAAGGATAGCCCAAGAAAAAATGGTTCTTCTGAGAGAGTATGTGTCGCGAAGAAAGAAGCAGAAGCTGCAACAGCAACAAAGGTGGCCAAAGGAATGATGTATAGACCAAGAAATGCTTCTCCTGAGAGAGTATTTGTTGCGAAAAAAGCAGAATCTGCAACTGCAACAATTGTGGCCAAAGGAATGAATGATAGACCAAGATATGTTTCTCCCGAGAGAATGTTCATCATGAAAAAAGCAGAATCTGCAACAGCAACAATGGTGGCTAAAGGAATGAAGGATAGACCAAGATATGTTTCTCCTGAGAGAGTATTTGTCATGAAAAAAGAAGCAGAAGCTGCAGCAACAATGATGGCTGAAGGAATAAGGGATAGACCAAGAAACAATGCTTCCCCTCAAAGAGAATGCTTCAAGAAAACAGAAGCAGTAGCTGCAGCAACAATGGTGGCTAAAGGAATGAAGGATAGGCCAATGTATGTTTCTCCTGAGAGAGTATTCGTCATGAAAACAGAAGCAAAAGCTGCAGCAACAATGGTTGTCAAAGGAATGAAGGGTAGACCAAGAAGAAATTCTGCTCCTGCTGTTATTATAATAGACTGA 1221 0.4079 MTFCHNHYLQKIPKKIVMNLGEELWKNALIFLIGSSGEKWQVSILKKENNIYLQNISWQKFLKDNSVLHEELLLFTYKAENRFQVQIFGMNGLERPCFQKEQEVAAPIVPETMTGSQQKTPVLDSVCVKEENEEAVATVVVKRKRGRPRKNPPPERCVKQKEVEAEAAVTMVAKGMQNRPRTNASPERVCVKKKETESAAKTVAKGMKDSPRKNGSSERVCVAKKEAEAATATKVAKGMMYRPRNASPERVFVAKKAESATATIVAKGMNDRPRYVSPERMFIMKKAESATATMVAKGMKDRPRYVSPERVFVMKKEAEAAATMMAEGIRDRPRNNASPQRECFKKTEAVAAATMVAKGMKDRPMYVSPERVFVMKTEAKAAATMVVKGMKGRPRRNSAPAVIIID 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02990 406 SUPERFAMILY DNA-binding pseudobarrel domain 3 95 IPR015300 -
Trre7g02990 406 SMART B3_2 3 91 IPR003340 GO:0003677
Trre7g02990 406 PANTHER B3 DOMAIN-CONTAINING 11 255 - -
Trre7g02990 406 MobiDBLite consensus disorder prediction 186 219 - -
Trre7g02990 406 Gene3D - 1 92 IPR015300 -
Trre7g02990 406 ProSiteProfiles B3 DNA-binding domain profile. 1 91 IPR003340 GO:0003677
Trre7g02990 406 MobiDBLite consensus disorder prediction 177 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02990 Trre-Chr7 27066448 27067668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02990 37 94 B3 DNA Binding Superfamily AT2G16210 37.931 2.08e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02990 - - tpra:123919002 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02990 7 27066448 27067668 Trre7g02990 7 27066448 27067668 ECH