Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02958 ATGGAGATTCTCCACTCCGACGAAACCTCACCAGAGCCTTCTATCCCTACCCCGAACGACGATTCCGCAGACCCTGACGAAGGTGCGACTCTCGATGTATCTGGAAAGAATCTGGAGTTTCCGGTACCGGAGAATCCCCAAGACGATGCCGTTGAGAGTTTGTATATGTATAAGAATGTTTACAGTTTGATTCCGAAGACTGTTGGTGCTTTGGTTAGATTGAAAACTCTGAAATTCTTTGGAAATGAGATTAATTTGTTTGCACCAGAGTTTGGGAACATGACGAGGTTAGAGAGGTTGCAGATGAAGGTATCTTCACCTGGAATTGGTGGGTTGCCGTTACATAAATTGAAGGGTTTGAAAGAACTTGAGCTTTCTAAAGGTCCTTCTAGGCCTTCTGCTTTTCCTATATTGACTGAGATTGCTGCTCTCAAGTGTTTGACAAAGCTTTGCATTTGTCACTTCTCTATAAGATACCTTCCTCCGGAAATTGGGTGCTTAAAGAATCTGGAGTATCTTGATCTTTCATTCAATAAAATGAAGACATTGCCCCCAGAGATTTGTTCTTTGGAAGTATTAATATCCTTGAAAGTTGCGAATAATAAGTTGGTGGAACTACCACTGGCCATGACCTCACTATCAAGGTTGGAGAGTTTGGACCTGTCAAATAATAGGTTGAGTTCATTAGGGTCTCTTGAACTTAGCTCAATGCATAGACTTCAGAGCTTAAATCTTCAGTGCTTCACATGGAGGGACCGCATTGAAGGTGCCTCTGTGCATCCAAGATGCAAAGACAACTATAGCAGTTCTTCTGTTGAAATGGATGTCTACGAAAATAATTTACAGGAAAATGAGGAAACTTTTTCTCATGGCACTCAGAACACCTCATCAAGCATATTAACAAACAACTCATCTAACAATAGAGGTTTTGCAGCCTGGAAGTCGGGTAGACGGTGGAAGCGACGGCACACTAAACAGCAGAAAACTCGTCAAGAGCAGAAAGCTCGTCAAGAGCGGTTGAATAACAGCAGGAAGTGGAAAGGTGTAGATCATGACCAGTTGTTAAGCAAGAAGATCCACAGAATTTCTGAACCAGAAAATCTGGATACTCTTGTTTCTGAAAATGACATAGTAACTGTACCAGACAATGGGAGCCTGAATGACAATCATGAAAAAATATTCTCCGAAGAAGCAGTCCACAACAATTTAATTGATAATGTCAATAATGATAGTCTGGATGACAATCATAAAAAAATATTCTCCGAAGAAGCAGTGCACATCAATTTAATTGATAATGTTAACGATGATGAGGTAATCATTGAAAAGCAGTTTTCTCAAGAAGATTGCTGCACTGCAGAAGGTAAAGATGAAAGAGATGCATCCTCACGCTCCTTAGACAATGTGCGAAGTGAACAAGATGGAGCATCTTGTTCAGATTTTTCAAAGTGTAATTTTAAATCAAAGAGGCATTCAGATCGAGATCTCGATAATCCTAAACCCTGCAAGTCTAGAAAACCAATTGGTGATGGCTCAATATTGTCTTCCAAGTACAGTAAAATTTCATTTTGTGGTACCGAGGACCATCTATCAGATGGCTTTTATGATGCGGGACGCGATCGACCATTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCATCTCGTGAAGTCATCCTGTTAGACAGACAAAGGGATGAAAAATTGGATGCCATCATGCTATCTGCTCAGGCAATGGTCTCTAATTTGAAGCAGTTAAATGATTTAAACAAACCTGGGAGCCAGGGTGAAGTTGATAACTTGCAGACAGCATCACTGCTTGCACTCTTTGTATCTGATCATTTTGGCGGAAGTGACAGAGGTGCTATTATAGAAAGGACACGGAAATCTGTTTCTGGTTCAAACTACAATAAACCTTTTGTCTGTACATGTTCGGCCGGAAGTAGCACAAGTATAAATGTTGCAACTGAACCAGCTGTGAACACCATAGAAGATATTGATCTTTCTAAGATCTCTGAAAAAAATCTCGATTCTATAAAAAAAAGACGAAAGTCAATCATTGTTCCAATTGGTTCTGTTCAGTATGGCGTATGTAGGCATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATAGAGCCACCTGTACCTTGTGAGCTTGTTAGGGGTTACATGGATTTTTCACCACATGCCTGGAATATCATTCTTGTAAAGAGGGGTGTTACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCTCATGATATTAGAGAAGAGAAAGATTCAGAATTTTCCTGCAGGTACATACCTCTTAGACGAACCCAAATTCCTCTTTCGACTAGCAGTCTTCCTAATCCCGATTATTCCTTTCCATCTCTCTCTAACTGTGATGAACTTGAGAAAAAAGCTTCAACTACATTAGTTCGGTGCAAATATGGATCAGTTGAGGCTGCAGTCAAGGTGCGTACTTTGGAAGTACAAGGGAGTTCAGCAGACAAAATAAAAAACTTTGAATATAATTCTTTGGGAGAAATCAGAATTCTTGGCGCTTTTAAACACCCCTGCATAGTGGAAATGTATGGTCACCAAATATCATGCAAATGGACTGTCTCAGCTGATGGCACTCCTGAGCATCGTGTGTTGAGATCTGCAATTTTTTTGGAATATGTGGAAGCGGGTTCCTTAAAAACCTATCTAGCGGAGTTGTCAGGAGCTGGTGAAAAGCATGTTCCTGTGGAGTTAGCCTTGTATATTGCCAAAGATGTCTCATGTGCTTTGTCGGAGCTGCACTCGAAGCACATAATTCATCGTGACATAAAAAGTGAAAACATTCTGTTTGATTGTGATAGGAAGAGAGATGATGGAACTCCCACTGTGAAGCTCTGTGATTTTGATAGTGCAGTGCCGCTAAGATCACCTTTACATGCATGCTGTATTGCTCATGTGGGAACTCCTCCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCTCCGGAGGTCATGCGGACTATGTATAAAAAGAACACTTATGGATTGGAAGCGGATATTTGGTCATTTGGGTGTTTACTTCTAGAGATGCTAACTTTGCGAATTCCATATTTTGGATTACCCGATTCACATGTCCATGATAGTCTGCAGATGGGTAAGCGACCACAATTAACTGATGAACTGGAGGCATTGAGTTCAATGGGCGAACCCACGATGATTCAATCTGGTGAAGAGCTGGAAAAATCAGATGCTGAGACAGACACACTGAAGTTCCTTGTTGATTTGTTTCATAGGTGTGTTGAAGAAAATCCAAATGAACGACCTACAGCTGAAGAAATCTATGAAATGCTGCTTGAACACACAAGTCGCATACAAGTTCAAAATGCTGGGGAGATTTAG 3393 0.4094 MEILHSDETSPEPSIPTPNDDSADPDEGATLDVSGKNLEFPVPENPQDDAVESLYMYKNVYSLIPKTVGALVRLKTLKFFGNEINLFAPEFGNMTRLERLQMKVSSPGIGGLPLHKLKGLKELELSKGPSRPSAFPILTEIAALKCLTKLCICHFSIRYLPPEIGCLKNLEYLDLSFNKMKTLPPEICSLEVLISLKVANNKLVELPLAMTSLSRLESLDLSNNRLSSLGSLELSSMHRLQSLNLQCFTWRDRIEGASVHPRCKDNYSSSSVEMDVYENNLQENEETFSHGTQNTSSSILTNNSSNNRGFAAWKSGRRWKRRHTKQQKTRQEQKARQERLNNSRKWKGVDHDQLLSKKIHRISEPENLDTLVSENDIVTVPDNGSLNDNHEKIFSEEAVHNNLIDNVNNDSLDDNHKKIFSEEAVHINLIDNVNDDEVIIEKQFSQEDCCTAEGKDERDASSRSLDNVRSEQDGASCSDFSKCNFKSKRHSDRDLDNPKPCKSRKPIGDGSILSSKYSKISFCGTEDHLSDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRQRDEKLDAIMLSAQAMVSNLKQLNDLNKPGSQGEVDNLQTASLLALFVSDHFGGSDRGAIIERTRKSVSGSNYNKPFVCTCSAGSSTSINVATEPAVNTIEDIDLSKISEKNLDSIKKRRKSIIVPIGSVQYGVCRHRALLFKYLCDHIEPPVPCELVRGYMDFSPHAWNIILVKRGVTWVRMLVDACRPHDIREEKDSEFSCRYIPLRRTQIPLSTSSLPNPDYSFPSLSNCDELEKKASTTLVRCKYGSVEAAVKVRTLEVQGSSADKIKNFEYNSLGEIRILGAFKHPCIVEMYGHQISCKWTVSADGTPEHRVLRSAIFLEYVEAGSLKTYLAELSGAGEKHVPVELALYIAKDVSCALSELHSKHIIHRDIKSENILFDCDRKRDDGTPTVKLCDFDSAVPLRSPLHACCIAHVGTPPPCVCVGTPRWMAPEVMRTMYKKNTYGLEADIWSFGCLLLEMLTLRIPYFGLPDSHVHDSLQMGKRPQLTDELEALSSMGEPTMIQSGEELEKSDAETDTLKFLVDLFHRCVEENPNERPTAEEIYEMLLEHTSRIQVQNAGEI 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02958 1130 FunFam Leucine-rich repeat protein kinase family protein 840 1121 - -
Trre7g02958 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 935 947 IPR008271 GO:0004672|GO:0006468
Trre7g02958 1130 SMART LRR_bac_2 213 232 - -
Trre7g02958 1130 SMART LRR_bac_2 365 383 - -
Trre7g02958 1130 SMART LRR_bac_2 167 186 - -
Trre7g02958 1130 SMART LRR_bac_2 190 209 - -
Trre7g02958 1130 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 97 1122 - -
Trre7g02958 1130 MobiDBLite consensus disorder prediction 314 329 - -
Trre7g02958 1130 MobiDBLite consensus disorder prediction 330 347 - -
Trre7g02958 1130 MobiDBLite consensus disorder prediction 467 482 - -
Trre7g02958 1130 PRINTS Leucine-rich repeat signature 213 226 - -
Trre7g02958 1130 PRINTS Leucine-rich repeat signature 170 183 - -
Trre7g02958 1130 MobiDBLite consensus disorder prediction 450 466 - -
Trre7g02958 1130 MobiDBLite consensus disorder prediction 483 503 - -
Trre7g02958 1130 ProSiteProfiles Leucine-rich repeat profile. 169 190 IPR001611 GO:0005515
Trre7g02958 1130 SMART serkin_6 798 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02958 1130 SUPERFAMILY L domain-like 37 306 - -
Trre7g02958 1130 Gene3D Transferase(Phosphotransferase) domain 1 793 1128 - -
Trre7g02958 1130 MobiDBLite consensus disorder prediction 450 507 - -
Trre7g02958 1130 MobiDBLite consensus disorder prediction 286 311 - -
Trre7g02958 1130 SUPERFAMILY Protein kinase-like (PK-like) 794 1115 IPR011009 -
Trre7g02958 1130 SMART LRR_typ_2 213 236 IPR003591 -
Trre7g02958 1130 SMART LRR_typ_2 167 190 IPR003591 -
Trre7g02958 1130 SMART LRR_typ_2 71 93 IPR003591 -
Trre7g02958 1130 ProSiteProfiles Leucine-rich repeat profile. 215 236 IPR001611 GO:0005515
Trre7g02958 1130 Pfam Protein kinase domain 832 1113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02958 1130 SMART LRR_sd22_2 167 192 - -
Trre7g02958 1130 SMART LRR_sd22_2 213 234 - -
Trre7g02958 1130 MobiDBLite consensus disorder prediction 286 347 - -
Trre7g02958 1130 Pfam Ethylene-responsive protein kinase Le-CTR1 667 750 - -
Trre7g02958 1130 MobiDBLite consensus disorder prediction 1 45 - -
Trre7g02958 1130 Gene3D Ribonuclease Inhibitor 27 314 IPR032675 -
Trre7g02958 1130 ProSiteProfiles Protein kinase domain profile. 794 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02958 Trre-Chr7 26410011 26417971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02958 814 1118 MAP Kinase Kinase Kinase AT5G66850 29.221 1.31e-22 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Trre7g02958 Pkinase 1.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02958 - - tpra:123913087 2006.11