Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02849 ATGTCGTCGGAGTCCACAGCCACATCAACTTCTCTCATGAGTTTGAAAGTTTTCGTTTTAGCAGGAATTTTCCTCATCATCGTTATAATAATCGTGCTTTTGATCTTCCTCTGTTTTCGAAGTAACCGAAGCTGCAATAAACGGAAGCTGTTACCGAAGCTACATAGCTCCGGCACCACTCCTCTGGTTTCTAAGGAAATCGCGGTGGTTAAGGAAATTGATCTCACGCGCTCCACTGAGCAAACACGGATTGAGATTCTTGATGAGATGAAGGAGGCGGAGATTAAGGTTGAAATTGGAGAAGTTAGGAAAGGTGACGTGTCAGGTGGTGGGGTCCACATGGAGGAGGAGGATCCAAATATAGGGTGGGGTCGGTGGTATAGTTTGAAGGAAGTGGAAATAGCGACACGTGGATTTGCGGAAGGGAATGTGATTGGTGAAGGAGGGTATGGTGTTGTATATAGAGGTGTATTGCAAGATTCTGTCGTGGCTGTGAAGAATCTTCACAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGCAAAGTAAGGCATAAGAATTTAGTTCGTTTAGTAGGATATTGTGCAGAAGGTGCTCGAAGGATGCTTGTTTATGAATATGTTGAAAATGGAAACTTGGAGCAATGGCTGCATGGTAATGTAGGACCATTTAGCCCCTTGACATGGGATATTCGAATGAAGATTGCCATTGGAACTGCCAAAGGGCTAAGCTATTTGCATGAAGGTTTAGAACCCAAAGTTGTGCATCGAGATATAAAATCTAGCAACATCCTTTTGGACAAAAATTGGAATGCCAAAGTTTCGGATTTTGGACTTGCCAAACTCTTAGGATCTGAGAAAACTCATGTAACCACACGTGTAATGGGAACATTTGGATATGTTTCGCCTGAGTACGCAAGCACAGGTATGCTTAATGAGCGTAGCGATGTTTATAGTTTTGGAGTTCTACTCATGGAAATAATCACAGGAAGATGCCCTATCGATTATTCAAAACCACCCGGAGAGATGAATTTGGTTGATTGGTTTAAGGGAAAGGTAGCAAGTCGCCGCAATGACGATCTAGTTGATCCTTTGATTGAGATTCCACCTTCTCCAAGATCTCTGAAGCGGGTTTTACTGATTTGCCTACGCTGTATAGATCTGGATGTGATCAAGCGACCGAAGATGGGTCAAATCGTTCATATGCTTGAGTCAGATGATTTCCCCTTTCGTTCTGAGCTACGTACAATTAGGGACAAAGATTCTGCGCCATCTCAAGCAGATGATTCTATCAAAGTTCCATATCTAAGAAATCTTGCAGAACCTGCGGAAAAATCAACACATAGATGA 1368 0.4298 MSSESTATSTSLMSLKVFVLAGIFLIIVIIIVLLIFLCFRSNRSCNKRKLLPKLHSSGTTPLVSKEIAVVKEIDLTRSTEQTRIEILDEMKEAEIKVEIGEVRKGDVSGGGVHMEEEDPNIGWGRWYSLKEVEIATRGFAEGNVIGEGGYGVVYRGVLQDSVVAVKNLHNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVENGNLEQWLHGNVGPFSPLTWDIRMKIAIGTAKGLSYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRCPIDYSKPPGEMNLVDWFKGKVASRRNDDLVDPLIEIPPSPRSLKRVLLICLRCIDLDVIKRPKMGQIVHMLESDDFPFRSELRTIRDKDSAPSQADDSIKVPYLRNLAEPAEKSTHR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02849 455 FunFam Putative receptor-like serine/threonine-protein kinase 214 424 - -
Trre7g02849 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Trre7g02849 455 Gene3D Phosphorylase Kinase; domain 1 112 213 - -
Trre7g02849 455 SMART serkin_6 139 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02849 455 ProSiteProfiles Protein kinase domain profile. 139 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02849 455 Gene3D Transferase(Phosphotransferase) domain 1 214 421 - -
Trre7g02849 455 SUPERFAMILY Protein kinase-like (PK-like) 120 410 IPR011009 -
Trre7g02849 455 FunFam Probable serine/threonine-protein kinase At1g01540 119 213 - -
Trre7g02849 455 Pfam Protein kinase domain 141 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02849 455 ProSitePatterns Protein kinases ATP-binding region signature. 145 166 IPR017441 GO:0005524
Trre7g02849 455 PANTHER OS01G0323000 PROTEIN 4 428 - -
Trre7g02849 455 CDD STKc_IRAK 145 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02849 Trre-Chr7 24850439 24854174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02849 119 410 Receptor kinase-like Gene Family AT4G02010 47.475 6.99e-90 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Trre7g02849 PK_Tyr_Ser-Thr 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02849 - - tpra:123913149 786.178