Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02839 ATGTTTCTTTCATGTCAAAAACACACCCTTTACTTTCATTCTTCTTCTATCCACTCCTCAAAGAACCCAAAACTCACCATTATCATCAATTGTCATAACCCAAATGAACAACAACACAAAAACCACCTTATTCCTCGAACACAAAATTCAAAATCAACATCATTTCTCATTCAACACCTTTCACAAAAAAACAACAACAACAACACTAACCCTTCACCCACTGAGTTACAAGACTCAACAACCCATGAAGAAAAAATCAAACTTTTAGAACTTTCTTTAGTAAGAAAAAGAACCCCTCAATTTCCTGGTTCAATTTATGCTCAATCTCCTAGTGATCCTGATGTGGGTTCTTCTCTTCCTCCTCTTCGTACCCTTTTTCGATCGGGTGATCAAGAAGAGGAAGAGATGATTATGCAAGCTCTTGAGATTCGTAGGAAGGTTACTCAAGAGGTTTTTAAAGATGCAATGCGAAATGGTAAATTTGGTATTACTTATAGTACTAATTTGGTTGATAGGTTGGGTGGTTTCATTGATTATGTTATGATTGAAGCTGCTAATTTGAAAAGATTACCGGAATATTCCAACTCCACTTTTAATTTACGCGCCAAAACTGTTATTGAAGATTCACAAGTTGTGCCACTTATCAGATGGTTGAAGCATAATTCGCTATCGTATCCAGAGATAGCTAAGCTTATTTTGATGTCAAGAGGGAAACTTGAGTCCATCAGGAACCGTGTTGAGTGGTTGAAGTCGGTGCTGGTTAAGGGAGACTTTATTGGTCGTGCAATGTTGAAGAGTGGAGATGATTTTTTGCTGCGGAGCGATGCGGAGTTGGATGAGATTGTTGAGTATTTAGTGTTAAATGGAGTTAGGAGGGAATGGATGGGTTTTGTTTTGAGTCGGTGTCCGAAGTTGTTATCTTATAGCTTGGAAGAAGTGAAGACTCGCGTGCAGTTCTATCTGGATATGGGTTTAGATGAGAAGGATTTTGGCACCATGGTTTTTGATTTTTCTAAAGCACTCGGTCACTATACTCTCGAAGAAATGCACCGAAAGGTTGATTACTTGAAAGAATTCGGACTTGAAAGTAAGGATGTTGGTAAGTTGCTTGCATTTAGGCCAGAATTGATGGCGTGCAGCATTGAAGAACGGTGGCAACCTCTTGTTAAGTATCTGTACTATTATGGGATTACCCGAGATGGGATGAAGAGAATGCTTATCATTAAACCTATGGTCTTTTGCATTGACTTGGAGATGAATATTGTGCCAAAGGACTTAGGGGTTCGAAATGACGGGATTGCCAACATGTTTGTCAAATTTCCTCCTCTACTCACTTACAGCCTGTACAAGAAGATTAGGCCTGTGGTCATATTCTTGATGACCAAGGCTGGAGTCACTGAAGAATCTATTGGAAAGGTTATTGCTCTTGGACCTCAACTCTTGGGATGCAGCATAGTACATAAGCTCGAAGTAAATGTAAAATATTATTTATCTCTTGGCATACGTCTTCGACAACTTGGTGAAATGATTGCTGATTTCCCGATGCTGCTCAGATACAATACAGATGTTCTCCGTCCTAAGTATACGTATTTGCGGAGAACCATGGTTCGAACTTTGCAAGATCTCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTCGAGGGTCGAATTATCCCAAGACATAAGGTTCTGGTGGAGAATCAGATTAACGTCAAGTTAAAATGCATGTTAGCTTGCACAGATGAAGAATTTGACAAAATGGTCAAGAATATAATTAGAAAACGCGACACATTTCAATCTTCTTCCATGAAGGCGAATACCGCTCATCCCCAATCTCTCATTACCGGGGATATTACTACCCCCGAGACGTAA 1872 0.3948 MFLSCQKHTLYFHSSSIHSSKNPKLTIIINCHNPNEQQHKNHLIPRTQNSKSTSFLIQHLSQKNNNNNTNPSPTELQDSTTHEEKIKLLELSLVRKRTPQFPGSIYAQSPSDPDVGSSLPPLRTLFRSGDQEEEEMIMQALEIRRKVTQEVFKDAMRNGKFGITYSTNLVDRLGGFIDYVMIEAANLKRLPEYSNSTFNLRAKTVIEDSQVVPLIRWLKHNSLSYPEIAKLILMSRGKLESIRNRVEWLKSVLVKGDFIGRAMLKSGDDFLLRSDAELDEIVEYLVLNGVRREWMGFVLSRCPKLLSYSLEEVKTRVQFYLDMGLDEKDFGTMVFDFSKALGHYTLEEMHRKVDYLKEFGLESKDVGKLLAFRPELMACSIEERWQPLVKYLYYYGITRDGMKRMLIIKPMVFCIDLEMNIVPKDLGVRNDGIANMFVKFPPLLTYSLYKKIRPVVIFLMTKAGVTEESIGKVIALGPQLLGCSIVHKLEVNVKYYLSLGIRLRQLGEMIADFPMLLRYNTDVLRPKYTYLRRTMVRTLQDLIEFPRFFSYSLEGRIIPRHKVLVENQINVKLKCMLACTDEEFDKMVKNIIRKRDTFQSSSMKANTAHPQSLITGDITTPET 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02839 623 MobiDBLite consensus disorder prediction 62 77 - -
Trre7g02839 623 Gene3D Transcription termination factor 3, mitochondrial 358 594 IPR038538 -
Trre7g02839 623 SMART mt_12 507 537 IPR003690 GO:0003690|GO:0006355
Trre7g02839 623 SMART mt_12 539 570 IPR003690 GO:0003690|GO:0006355
Trre7g02839 623 SMART mt_12 434 466 IPR003690 GO:0003690|GO:0006355
Trre7g02839 623 SMART mt_12 331 362 IPR003690 GO:0003690|GO:0006355
Trre7g02839 623 SMART mt_12 296 326 IPR003690 GO:0003690|GO:0006355
Trre7g02839 623 SMART mt_12 367 398 IPR003690 GO:0003690|GO:0006355
Trre7g02839 623 SMART mt_12 471 502 IPR003690 GO:0003690|GO:0006355
Trre7g02839 623 PANTHER CGI-12 PROTEIN-RELATED 271 369 IPR003690 GO:0003690|GO:0006355
Trre7g02839 623 MobiDBLite consensus disorder prediction 62 81 - -
Trre7g02839 623 Pfam mTERF 226 357 IPR003690 GO:0003690|GO:0006355
Trre7g02839 623 Pfam mTERF 348 584 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02839 Trre-Chr7 24732037 24734771 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre7g02839 mTERF 1.8e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02839 K15032 - mnt:21401514 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02839 7 24732037 24734771 Trre7g02839 7 24732037 24734771 ECH