Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02832 ATGTCGTCTGCAGATGTTGAATACCGGTGCTTCGTCGGCGGTCTTGCATGGGCCACCGACAGTGATGCTCTCGAGAAAGCTTTCTCTTCCTACGGCGAGATCGTTGATTCGAAGATCATTAACGATCGTGAGACTGGAAGGTCAAGAGGATTTGGATTTGTGACATTTGCTAATGAGAAATCAATGAGAGATGCTATTGAAGGAATGAACGGTCAGAACATGGATGGTCGTAACATTACCGTTAACGAGGCACAAAACAGATCCAGTGGTGGAGGAGGTGGTGGTGGTGGTTATGGTGGTGGTCGTCGTGAAGGTGGATACAATAGAAGCAGTGGTGGAGGTGGAGGATATGGAGGAGGAGGTGGTGGTGGTTATGGTGGTGGTAGGGACCGTGGTTATGGTGATGACGGTGGTTCCCGTTATTCTTCTCGCGGTAGTGGCGGTGGTGGTGGAAACTGGAGGGAGTAG 468 0.5064 MSSADVEYRCFVGGLAWATDSDALEKAFSSYGEIVDSKIINDRETGRSRGFGFVTFANEKSMRDAIEGMNGQNMDGRNITVNEAQNRSSGGGGGGGGYGGGRREGGYNRSSGGGGGYGGGGGGGYGGGRDRGYGDDGGSRYSSRGSGGGGGNWRE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02832 155 SMART rrm1_1 9 82 IPR000504 GO:0003723
Trre7g02832 155 MobiDBLite consensus disorder prediction 73 89 - -
Trre7g02832 155 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Trre7g02832 155 MobiDBLite consensus disorder prediction 68 155 - -
Trre7g02832 155 FunFam Glycine-rich RNA-binding protein GRP1A 2 111 - -
Trre7g02832 155 Gene3D - 2 121 IPR012677 -
Trre7g02832 155 PANTHER GEO13361P1-RELATED 4 148 - -
Trre7g02832 155 CDD RRM2_NsCP33_like 9 84 - -
Trre7g02832 155 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Trre7g02832 155 SUPERFAMILY RNA-binding domain, RBD 8 121 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02832 Trre-Chr7 24635086 24635781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02832 10 88 Eukaryotic Initiation Factors Gene Family AT4G34110 39.241 1.33e-09 53.9