Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02830 ATGGGAGTTGCAACTAATGGTGGACCCTATCGTTCTACTCAGCACTGTTATAAGTTAAATTTTCAGTTCACATCTATAGTTCAAAGGCTTTGTAACCAAGATATTGTGAAATCTCCGTTTAACTTTACTCCAATTGCTGAAATTATCAATGGCTCTTATGACACTGATTTTTTAGTGGATGTGATTGGGTTTTTAACTGGTGTTGGGTGTGAGCGTGAAATTACCAACCAAAATGGGGTTACATCAAAGCTGAATGTTATTGAGCTAGAGGCTGATGGGCATAAGATACAATGCTCATTGTTTGGGGCTTATGTTGATCTGCTTAATGGTTTTCTTGGAGCTGGAGATGTGCAGAATGTTGTTGTCATTCTGCAGTTTGCAAAGGCTAAAAAATTTCAAGACAACATTCACATACAAAACTGCATGAACTGTACCGTATTGTTATTTAACCCTAGCTGTGAAGAAGCTGTTAGTTTCAAGTCAAGGCAACTTGAAACTTTTGAAACTCCAACTCCCGGTACTTTAACTCAAATCAATGTTGAGAGTCAAGTTCAACCCATGGATGAGTTTTTGTTCAACACCCCAAGAAGCACTCTGCAGGCTCTTAAAGAGGCCACTACTGAAAAATTGTTTGTTGTGCTTGGGACTGTCAAAAGGATTTTAAATCCTGACTCCTTTTGGTATACTGCATGTATATGCAACAAGGCTGTCATCCCTGATTCAAGGATGTTTTATTGTGAGAAGTGCAATAAACATGTTTCTAAAGTTTTTCCTAGGTAA 780 0.3808 MGVATNGGPYRSTQHCYKLNFQFTSIVQRLCNQDIVKSPFNFTPIAEIINGSYDTDFLVDVIGFLTGVGCEREITNQNGVTSKLNVIELEADGHKIQCSLFGAYVDLLNGFLGAGDVQNVVVILQFAKAKKFQDNIHIQNCMNCTVLLFNPSCEEAVSFKSRQLETFETPTPGTLTQINVESQVQPMDEFLFNTPRSTLQALKEATTEKLFVVLGTVKRILNPDSFWYTACICNKAVIPDSRMFYCEKCNKHVSKVFPR 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02830 259 Gene3D - 33 169 IPR012340 -
Trre7g02830 259 SUPERFAMILY Nucleic acid-binding proteins 40 162 IPR012340 -
Trre7g02830 259 SUPERFAMILY Nucleic acid-binding proteins 195 257 IPR012340 -
Trre7g02830 259 Gene3D - 189 259 IPR012340 -
Trre7g02830 259 CDD RPA1_DBD_B_like 60 163 - -
Trre7g02830 259 Pfam Replication factor-A C terminal domain 212 255 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02830 Trre-Chr7 24628332 24629597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02830 17 252 Core DNA Replication Machinery Family AT2G06510 23.346 1.22e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02830 - - tpra:123915358 376.326