Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02825 ATGTTACACTGTCTGAACACTTCGGGAAATCTAGTCGGAGGAGGAACAATTTCCGACATGACAGTGTTAGAAAGACAAAGAGAAAGAATCAAGTTTCAAAATGAACACCAACAATTTTCTGTAAATGGATTCTCTTCTTCTTCACATCAACAACAACAATTTATGATGCTTGGTTGCGATTCCGCTCTCGGCGAAATCGTAGCTAACTCAATGAAACCTGATCCGGATTGTGAAAACAACAGGTTTGAAGATGAAACTGTTAAGAAAAGGAAAATTGATAATAAGATTGATATGAATTCTAAAGACAAGAGGTTCAAAGTGTGCGTAGAAGAAAGTGAATCCAAAATCACAGAGCAAAAAAAAGGACAGAAGAATGCAAAGTTGAACAATGGAAACAAAAATAAGAGAGAAAATTGTGATGATAATAATTCGAAGGAAAATTCGAAAGGGTCTGAGGTTCAGAATCAGAAGCCTGATTACATTCATGTTCGTGCTCGTCGTGGTCAAGCCACTGATAGTCATAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATAAGTGAAAGGATGAAATATTTGCAAGATTTAGTGCCAGGATGCAACAAAATTGCAGGAAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAATCTCTTCAAAGACAAGTTGAGTTCTTGTCGATGAAATTAGCAGCTGTAAACCCGAGACTTGACTTCAACATCGATGAATTGTTTGCCAAAGAGGTGTTTACTCAAAATTTTCCAACCATAGGGATGCCATCAGAAATGACTAACCCTGCATATCTTCAATTCAATTCAGCACAACAGCTAGTTTCATGTTGTGGCGGATTAATAAACAATATGGGAATAATCCCTCCCGAAATCGGACTTCGTAGGAACATTAATGCACCAACATCTGCATCTTTACCCGAAAACTTTCTCGACTCATCAGTTTTCACTCATATCTTACCCTCCTCAACTTGGGAAGGTGATTTTCAAAATCTTCATAATGTGGATTTTGATCAAGGACGATCAATATCATTTCCTTCTCAGCCATTCACAGGTATGGTTGAAGCTGGCAATATGAAGATGGAGATGTAA 1101 0.3742 MLHCLNTSGNLVGGGTISDMTVLERQRERIKFQNEHQQFSVNGFSSSSHQQQQFMMLGCDSALGEIVANSMKPDPDCENNRFEDETVKKRKIDNKIDMNSKDKRFKVCVEESESKITEQKKGQKNAKLNNGNKNKRENCDDNNSKENSKGSEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFTQNFPTIGMPSEMTNPAYLQFNSAQQLVSCCGGLINNMGIIPPEIGLRRNINAPTSASLPENFLDSSVFTHILPSSTWEGDFQNLHNVDFDQGRSISFPSQPFTGMVEAGNMKMEM 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02825 366 Gene3D - 166 240 IPR036638 GO:0046983
Trre7g02825 366 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 49 275 IPR024097 GO:0006355
Trre7g02825 366 FunFam Basic helix-loop-helix transcription factor 166 238 - -
Trre7g02825 366 SMART finulus 175 225 IPR011598 GO:0046983
Trre7g02825 366 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 238 IPR036638 GO:0046983
Trre7g02825 366 MobiDBLite consensus disorder prediction 130 147 - -
Trre7g02825 366 MobiDBLite consensus disorder prediction 112 159 - -
Trre7g02825 366 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 219 IPR011598 GO:0046983
Trre7g02825 366 Pfam Helix-loop-helix DNA-binding domain 173 220 IPR011598 GO:0046983
Trre7g02825 366 CDD bHLH_AtBPE_like 159 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02825 Trre-Chr7 24529423 24532377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02825 19 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 46.488 3.16e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Trre7g02825 HLH 3.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02825 - - gmx:100794256 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02825 7 24529423 24532377 Trre7g02825 7 24529423 24532377 ECH
Trre7g02825 7 24529423 24532377 Trre9g01011 9 7978873 7981736 ECH