Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02758 ATGATCAAGCCGTTGCTCTTCGCACCTCAGGAAATAAAAGTGCGTTTTACAATTGCGCAGTCCCTTTATGAGGGCTGCACTCTAAAGTCAATAGCCGAAAATGTGGGATATATCACGGCTCAAATTCGTCCAATGTTGTCAATTGAGACAGGATTTTCTATAACAAACATAAAAGTAATAGGTAATGGTCAAGTGTATCTCGGAAGACTATGGAGAGCATGCTCATTGCTCAAGAGTAATTTTCTCTTATACCTACATGGAAAATATTGTTCTCCCCCAATGATGGGATCACACTATGGGCAAAGACCAAGACCACCACTTGTTTATACAAATTATTATGCAAATTGTTATTTGTGTGTAAATGGAGGACTGCATACTACGGAGAATATAAATGTAGTAGATCTGGATCCAACTTTGCTGCAAGAGCTCCCTGGGTTCACAGATTGGCAGACCGAGAGGTCCATCCATTCATTGGCATTCACTTCATTGAAGGAGATACTACGCTGA 507 0.4063 MIKPLLFAPQEIKVRFTIAQSLYEGCTLKSIAENVGYITAQIRPMLSIETGFSITNIKVIGNGQVYLGRLWRACSLLKSNFLLYLHGKYCSPPMMGSHYGQRPRPPLVYTNYYANCYLCVNGGLHTTENINVVDLDPTLLQELPGFTDWQTERSIHSLAFTSLKEILR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02758 168 Gene3D - 15 150 IPR012334 -
Trre7g02758 168 SUPERFAMILY Pectin lyase-like 16 118 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02758 Trre-Chr7 23866141 23866835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02758 16 71 Carbohydrate Esterase AT5G55590 44.643 7.96e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02758 - K01051 mtr:25495763 70.0922