Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02757 ATGAAAAGCATCACATGTTATTTGCTTGCATTCTTCTGCTTATTATTTACATCATCTTCATCATTAACCGATCTTGATGCGTTGCTAAAGCTGAAGAAAACAATGAAAGGAGAGAAAACCAAAGAAGATGCACTCAAAGACTGGAAGTTTTCTACTTCGGTTTCGGCTCACTGTTCATTTTCTGGTGTAACATGTGATCAAGAACAACGAGTGATTGCTCTGAACATCACACAAGTTCCTCTCTTCGGATTTCTTTCAAAGGAGATCGGAGTGTTGGACAAGCTTGAGAGTTTGATCATCACCATGGACAATCTCACCGGCGAGCTTCCGGTTGAGATTTCCAGTCTTACTTCTCTTAAAATTCTCAACATCTCTCACAACACCTTCTCCGGAAACTTCCCCGGTAACATGACGCTCGGTATGAAGCAATTGGAGGTTCTGGATGCTTATGACAATAGCTTCGACGGTCCTCTACCGGAGGAAATCGTTAGGCTCGAGAACCTAAAGTTCTTATGTCTTGCCGGGAACTATTTCTCCGGTACTATACCGGAGAGTTACTCAGAGTTTCAAAGATTGGAGGTTTTAGCCTTAAACGCAAACAGTTTATCGGGGAAGATTCCGAAAAGTTTGTCTAAGTTAAAGACGCTTAAGGAACTACATCTCGGTTACTCCAATGCTTATGAAGGCGGAGTTCCACCGGAGTTTGGTTTGATGAAATATCTTCGATATCTTGAAGTGTCGAACTGTAACCTCACCGGCGAGATTCCACCGAGTCTTGGAAATTTGGAAAACCTTGATAGCTTGTTCTTGCAAATGAACAATCTCACTGGAACAATTCCACCAGAACTCTCTTCCATGAGAAGTCTCATGTCGTTGGATCTCTCCAACAACGAGCTCTCAGGAGAGATTCCTGAGAGCTTCTCAAAACTCAAAAACCTCACTCTCATGAATTTCTTCCGGAACAAGTTTCGCGGTTCACTTCCAGCGTTCATCGGTGATCTTCCTAATCTCGAAACACTTCAGGTTTGGGAAAACAATTTCTCTTTTGTGTTGCCACAGAACCTCGGTTCAAACGGAAAGTTCATTTACTTTGATGTTACAAAAAACCACCTCACCGGATTGATTCCACCGGATTTGTGCAAATCAAAGCGATTAAAAACGTTTATTGTTACAGATAACTTCTTTCACGGTCCAATTCCTTTAGGAATTGGCGCGTGTAAGTCATTGTTGACAATCCGAGTAGCTAATAACTTCTTGGACGGGCCGGTCCCACAAGGAACTTTCCAATTGCCTAATGTTCAGATAATGGATCTTGGAAATAACCGTTTTAACGGCCAACTACCTTTCGAAGTTTTTGGAGGTTCTCTCGGGACTCTCAAGCTCTCTAATAATTTATTCACTGGGAGGATTCCAGCTTCGATGAATAATCTCCGATCACTACATTCTCTTTTGCTTGATTCCAATCAATTTGTCGGAGAAATTCCAAAGGAAATATTTGACTTGCCGGCATTGGCAAATTTCAACACAAGTGGCAACAATCTCACCGGTGGTATTCCAACTACGGTAACTCGGTGTAGATCATTGATCACCGTTGACTTTAGTCGGAACATCCTTACCGGTGAGGTTCCAAAGGGGATGAAGAATATGAAGGTTTTAAGCATTTTGAATCTTTCACATAACAATATTTCGGGTCTAATCCCCGATGAGATTCGATTCATGACGAGTCTCACCACGTTGGATCTTTCTTACAACAATTTCACCGGAACTCTCCCCACGGGTGGTCAGTTTTTAGTCTTCAACGACAGGTCATTTTTCGGAAACCCTAACCTCTGCTTCCCACACCAATCTTCATGCATTTCCCTTCTCTACCCTTCGAGAAAAAGTCACACAAAGATCAAGGCCATTGTTATCGCAATTGCTCTTGCAACCGCGGTGTTACTAGTAATTGTGACCATGCACATGATGAGGAAGAGGAAACGCCACATGGCGAAAGCGTGGAAGTTAACGGCGTTTCAAAGGTTAGACTTCAAAGCAGAGGAAGTAGTGGAATGTCTAAAAGAAGAGAACATAATAGGAAAAGGAGGAGCCGGGATCGTGTACCGAGGGTCCATGCCAAATGGAACCGACGTCGCAATAAAGCGATTAGTTGGACAAGGAAGTGGTAGAAATGATTATGGATTCAAAGCTGAGATAGAAACATTGGGAAGAATCAGACACAGAAACATAATGAGACTTTTGGGTTATGTTTCAAATAAGGACACAAATTTGTTGTTGTATGAGTACATGCCTAATGGTAGTTTAGGAGAATGGCTTCATGGTGCAAAAGGTTGTCATTTGAGTTGGGAAATGAGGTATAAAATTGCTGTGGAAGCTGCTAAAGGACTTTGCTATTTGCACCATGATTGTTCTCCTCTTATTATTCATAGGGATGTTAAGTCTAATAATATATTGCTTGATGCTGATTTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGTATGATCCTGGTGCTTCTCAATCCATGTCCTCTATTGCTGGTTCCTACGGCTACATTGCTCCAGAGTATGCATACACACTGAAAGTGGATGAGAAAAGTGATGTGTATAGTTTTGGAGTGGTCCTATTGGAGCTAATTATAGGAAGAAAACCAGTGGGTGAATTTGGTGATGGTGTGGACATCGTTGGATGGATCAATAAAACTGAACTAGAACTTTATCAACCGTCCGATAAAGCATTAGTATCAGCTGTAGTGGACCCGCGACTCACAGGATACCCATTAACAAGTGTTATCTACATGTTCAACATAGCTATGATGTGTGTTAAAGAAATGGGACCTGCAAGACCTACCATGAGAGAAGTTGTTCATATGCTCACTAATCCACCTCACTCTATCACTCACAATTTAATTAATCTCTAG 2925 0.4174 MKSITCYLLAFFCLLFTSSSSLTDLDALLKLKKTMKGEKTKEDALKDWKFSTSVSAHCSFSGVTCDQEQRVIALNITQVPLFGFLSKEIGVLDKLESLIITMDNLTGELPVEISSLTSLKILNISHNTFSGNFPGNMTLGMKQLEVLDAYDNSFDGPLPEEIVRLENLKFLCLAGNYFSGTIPESYSEFQRLEVLALNANSLSGKIPKSLSKLKTLKELHLGYSNAYEGGVPPEFGLMKYLRYLEVSNCNLTGEIPPSLGNLENLDSLFLQMNNLTGTIPPELSSMRSLMSLDLSNNELSGEIPESFSKLKNLTLMNFFRNKFRGSLPAFIGDLPNLETLQVWENNFSFVLPQNLGSNGKFIYFDVTKNHLTGLIPPDLCKSKRLKTFIVTDNFFHGPIPLGIGACKSLLTIRVANNFLDGPVPQGTFQLPNVQIMDLGNNRFNGQLPFEVFGGSLGTLKLSNNLFTGRIPASMNNLRSLHSLLLDSNQFVGEIPKEIFDLPALANFNTSGNNLTGGIPTTVTRCRSLITVDFSRNILTGEVPKGMKNMKVLSILNLSHNNISGLIPDEIRFMTSLTTLDLSYNNFTGTLPTGGQFLVFNDRSFFGNPNLCFPHQSSCISLLYPSRKSHTKIKAIVIAIALATAVLLVIVTMHMMRKRKRHMAKAWKLTAFQRLDFKAEEVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGQGSGRNDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGCHLSWEMRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWINKTELELYQPSDKALVSAVVDPRLTGYPLTSVIYMFNIAMMCVKEMGPARPTMREVVHMLTNPPHSITHNLINL 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02757 974 SUPERFAMILY Protein kinase-like (PK-like) 679 960 IPR011009 -
Trre7g02757 974 FunFam Leucine-rich repeat receptor-like protein kinase 22 184 - -
Trre7g02757 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 654 761 - -
Trre7g02757 974 SUPERFAMILY RNI-like 74 424 - -
Trre7g02757 974 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 190 955 - -
Trre7g02757 974 FunFam LRR receptor-like serine/threonine-protein kinase EFR 331 622 - -
Trre7g02757 974 Pfam Protein tyrosine and serine/threonine kinase 686 960 IPR001245 GO:0004672|GO:0006468
Trre7g02757 974 SMART LRR_typ_2 573 596 IPR003591 -
Trre7g02757 974 SMART LRR_typ_2 430 454 IPR003591 -
Trre7g02757 974 SMART LRR_typ_2 262 285 IPR003591 -
Trre7g02757 974 SMART LRR_typ_2 477 501 IPR003591 -
Trre7g02757 974 SMART LRR_typ_2 334 358 IPR003591 -
Trre7g02757 974 SMART LRR_typ_2 286 309 IPR003591 -
Trre7g02757 974 SMART LRR_typ_2 549 572 IPR003591 -
Trre7g02757 974 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
Trre7g02757 974 SMART serkin_6 685 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02757 974 Pfam Leucine rich repeat 530 586 IPR001611 GO:0005515
Trre7g02757 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Trre7g02757 974 Gene3D Ribonuclease Inhibitor 182 225 IPR032675 -
Trre7g02757 974 Gene3D Transferase(Phosphotransferase) domain 1 762 970 - -
Trre7g02757 974 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Trre7g02757 974 Gene3D Ribonuclease Inhibitor 344 621 IPR032675 -
Trre7g02757 974 Pfam Leucine Rich Repeat 289 310 IPR001611 GO:0005515
Trre7g02757 974 Pfam Leucine Rich Repeat 241 262 IPR001611 GO:0005515
Trre7g02757 974 Pfam Leucine rich repeat N-terminal domain 23 66 IPR013210 -
Trre7g02757 974 Gene3D Ribonuclease Inhibitor 226 330 IPR032675 -
Trre7g02757 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 973 - -
Trre7g02757 974 PRINTS Leucine-rich repeat signature 573 586 - -
Trre7g02757 974 PRINTS Leucine-rich repeat signature 289 302 - -
Trre7g02757 974 SUPERFAMILY L domain-like 384 618 - -
Trre7g02757 974 ProSiteProfiles Protein kinase domain profile. 685 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02757 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 226 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02757 Trre-Chr7 23860267 23863702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02757 21 972 Receptor kinase-like Gene Family AT1G75820 61.771 0.0 1206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre7g02757 PK_Tyr_Ser-Thr 3.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02757 K00924 - gmx:732625 1400.19