Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02742 ATGGGAGAGGTAGCGCGTGGAGGTGGTTGTTGTCCTCCGATGGATCTATTCCGTTCGGAGCCGATGCAACTCATTCAGCTCATCATTCCCATCGAATCCGCTCACCGCACTGTTTCCTATCTCGGTGACCTTGGTCTCCTTCAGTTTAAAGATCTCAATTCAGAGAAGAGCCCTTTTCAACGGACTTATGCAGCTCAGATTAAAAGATGTGGAGAGATGGCTCGTAAATTACGTTTTTTCAAGGAACAAATGATTAAGGCAGGTGTTTCACCAAAAGGTTCCACAACAGAGTTTGATGCGAACATCGATAACATTGAGATAAAACTTACAGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCACGTACAATGAACTTGTTGAGTACAAGCTTGTTCTGCAGAAGGCTGGTGACTTTTTCCACTCAGCTCAAAGCCGTGCCATAGAGCAGCAAAGAGAATATGAATCACGCCAATTGAGTGGGGAATCTATGGAAACACCTTTATTACAGGACCAAGAATTACCAGGTGATTCATCAAAGCCGGTTAAGTTGGGGTTTTTAGCAGGTCTTGTTCCAAGGGAAAAGTCGGTGGCATTTGAGAGAATTCTATTTCGTGCTACTAGAGGCAATGTGTTTTTGAGGCAGACTGCTGTTGAGAATCCAGTCACAGACCCTGTTTCTGGAGAAAAGACGGAGAAAAATGTTTTTGTCGTCTTTTATGCTGGTGAAAAAGTCAAAGGCAAGATTCTGAAAATCTGTGATGCCTTTGGTGCTAATCGATACCCGTTTGCTGAGGAACTTGGAAAACAAGCTCAAATGATTTCTGAGGTTTCTGGGAGACTTGCAGAATTGAAGACCACCATAGATGCTGGACTTTTGCACCGAGTTAACTTGCTGGAAAATATTGGGACTCAATACGAGCAATGGAATCTTTTGGTGAGAAAGGAGAAATCCATTCACCATACCCTGAACATGCTAAGCCTTGATGTGACTAAAAAGTGCCTTGTGGGTGAGGGGTGGAGTCCTGTTTTTGCAACAAAGCAGGTCCAGGACGCATTGAAGCGGGCTGCAAAGGACTCTAATTCTCAAGTCAGTGCCATTTTGCAAGTTTTGCATACCAGGGAGTCACCACCTACCTACTTTCGCACGAACAAATTTACGTCTCCGTATCAAGGAATTATAGACTCATATGGGGTTGCCAAGTATCAAGAGGCAAATCCTACTGTGTTTACTGTAGTTACCTTTCCATTTCTTTTTGCCGTAATGTTTGGTGATTGGGGCCATGGAATATGTTTACTGCTTGCAGCTCTATATTTCATAGTCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACGGAGATGACTTTTGGAGGTCGTTATATTATTTTCATGATGGCACTCTTCTCAATCTACACTGGCGTGATCTATAATGAGTTCTTTTCTGTCCCATTTGAACTCTTCGGCCCCTCTGCATATGAGTGTCGTGACCTTTCTTGCAGGGATTCTACAACAATAGGACTGATAAAAACGCGTCCTACTTACCCTTTTGGATTGGATCCTGTATGGCATGGTACACGTAGTGAATTGCCATTCTTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTATAATGAGCTATTGCAATGCCAGGTTCTTCAAGAACAGCGTAAATGTATGGTTCCAATTTATCCCCCAGGTGATATTTCTTAACAGTCTATTCGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACGGGTTCTCAAGCTGATTTGTACCACGTAATGATCTACATGTTCCTGAGCCCAACAGATGATTTGGGTGAGAACCAACTCTTTGCGGGTCAGAAAAATCTTCAGCTTGTGCTTTTGCTTCTGGCCGGTGTTGCTGTGCCCTGGATGCTGTTGCCAAAACCTTTTATCTTGAAGAAGCAACATGAAGCAAGGCACGGGGATGAATCCTATGCACCACTTCCAAACACGGAGGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCATGGTCACGACGAGTTTGAGTTTAGTGAAATTTTTGTACATCAACTCATCCACACCATAGAATTTGTACTTGGAGCAGTATCTAATACAGCTTCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGATGATGGCATGGGGGTACAATAATGTGATTATCCTGATAGTTGGTTTAATTGTTTTCATTTTTGCTACCGTTGGAGTGTTACTTGTCATGGAAACTCTGAGTGCCTTCTTGCATGCACTGCGTCTTCACTGGGTGGAGTACCAAAACAAGTTTTATGAGGGTGATGGCTACTTGTTCCGTCCTTTCTCGTTCTCATTGATAGACGAAGAGGATGACGTGCTTTAA 2469 0.4293 MGEVARGGGCCPPMDLFRSEPMQLIQLIIPIESAHRTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQIKRCGEMARKLRFFKEQMIKAGVSPKGSTTEFDANIDNIEIKLTEIESELTEMNANGEKLQRTYNELVEYKLVLQKAGDFFHSAQSRAIEQQREYESRQLSGESMETPLLQDQELPGDSSKPVKLGFLAGLVPREKSVAFERILFRATRGNVFLRQTAVENPVTDPVSGEKTEKNVFVVFYAGEKVKGKILKICDAFGANRYPFAEELGKQAQMISEVSGRLAELKTTIDAGLLHRVNLLENIGTQYEQWNLLVRKEKSIHHTLNMLSLDVTKKCLVGEGWSPVFATKQVQDALKRAAKDSNSQVSAILQVLHTRESPPTYFRTNKFTSPYQGIIDSYGVAKYQEANPTVFTVVTFPFLFAVMFGDWGHGICLLLAALYFIVREKKLSSQKLDDITEMTFGGRYIIFMMALFSIYTGVIYNEFFSVPFELFGPSAYECRDLSCRDSTTIGLIKTRPTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNARFFKNSVNVWFQFIPQVIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFAGQKNLQLVLLLLAGVAVPWMLLPKPFILKKQHEARHGDESYAPLPNTEESLQVESNHDSHGHDEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLMMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGYLFRPFSFSLIDEEDDVL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02742 822 Coils Coil 102 129 - -
Trre7g02742 822 PIRSF ATP6V0A1 12 821 IPR026028 GO:0000220|GO:0046961
Trre7g02742 822 Pfam V-type ATPase 116kDa subunit family 40 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
Trre7g02742 822 PANTHER VACUOLAR PROTON ATPASES 16 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02742 Trre-Chr7 23788480 23799547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02742 14 820 Primary Pumps ATPases(2) AT2G21410 77.104 0.0 1300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02742 K02154 - gmx:100810062 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02742 7 23788480 23799547 Trre7g02742 7 23788480 23799547 ECH