Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02733 ATGAAGATCCGGTGTGATGCATGTCAGAAACAAAAGGCCTCTTTGTTCTGCCCTGCAGATGAAGCAGCTCTCTGCAATCCCTGTGATCATACAATCCATCAAGCCAACAAGCTCTCTGCCAAACACAAACGTTTCTCTCTTCACCACCCCACTTGCAAAGACATCCCTCTCTGTGATATCTGCAAGGAGAGACGTGCGTATCTATTTTGCAAAGAAGACAGAGCAATACTTTGCAGAGAATGTGATATTCCTATCCATAGAGACACTGAACTTACCAAGAAACATAACAGATTTCTTATCACAGGCGTAAAGATCGGTGCTGCTGTTTCTTCTTCAGACCCAACAACATCAAATGGCTCAGAAGTAAGAACTTCGCTTTCAAGAGAATCGCAACCAAGTTCATTTTCAAGTGAAAATAACCGTTGTTCTCGCACTTTCAAAGACAACATAACCTGTGACACAATTTCAACAAGTAGCATTTCTGAATACATTGAATCAATTCCTGGTTACTGCATGGAAGACCTTTTTGATGCTTCTTTTGCACCTAGTGTTTTCTGTAAGGATTATAAACAGAACCAAGATCATCGAGTCATAAGTATGTCTGACTCGGTACCACAATATGAAGTTAGATCCCCTCAGCTTAGCCTTAATGCTAATGTTAACGTTCCACAGATTGATTCTTTAGATGGGGTTATGAAAATGCCAGTAACAAAAGCTGTCGAAGGATATTCGAGTTGGAGATATTTGGATCGTTAA 756 0.4048 MKIRCDACQKQKASLFCPADEAALCNPCDHTIHQANKLSAKHKRFSLHHPTCKDIPLCDICKERRAYLFCKEDRAILCRECDIPIHRDTELTKKHNRFLITGVKIGAAVSSSDPTTSNGSEVRTSLSRESQPSSFSSENNRCSRTFKDNITCDTISTSSISEYIESIPGYCMEDLFDASFAPSVFCKDYKQNQDHRVISMSDSVPQYEVRSPQLSLNANVNVPQIDSLDGVMKMPVTKAVEGYSSWRYLDR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02733 251 CDD Bbox1_BBX-like 5 47 - -
Trre7g02733 251 MobiDBLite consensus disorder prediction 109 140 - -
Trre7g02733 251 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Trre7g02733 251 Pfam B-box zinc finger 56 96 IPR000315 GO:0008270
Trre7g02733 251 SMART bboxneu5 53 100 IPR000315 GO:0008270
Trre7g02733 251 SMART bboxneu5 4 47 IPR000315 GO:0008270
Trre7g02733 251 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Trre7g02733 251 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 213 - -
Trre7g02733 251 CDD Bbox1_BBX-like 57 100 - -
Trre7g02733 251 Gene3D Classic Zinc Finger 1 96 - -
Trre7g02733 251 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02733 Trre-Chr7 23602050 23603229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02733 1 209 C2C2-CO-like Transcription Factor Family AT4G39070 46.781 1.60e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Trre7g02733 zf-B_box 6.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02733 - - gmx:100790232 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02733 7 23602050 23603229 Trre7g02733 7 23602050 23603229 ECH
Trre7g02733 7 23602050 23603229 Trre9g01160 9 9349905 9352210 ECH