Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02730 ATGGCTTCATCTTCCACAAGAATTTCCAATTTGTCCCAAATTGATTGGGGTCACAAGATAGAAGGAGACCCAGTTGCTTATTTAGTTCACCCGTCTGGGAACACAGCGTGGATGGAATTTCACATAGACGGAGATAATTGCTACATGACGGACGGCAAAATAGTTTCACTTCTTTTTGGAATCAAACAACCAACCGAAGTAATACTTACATATAATGAACATAACACAACAATTACAATGAGAAATAGTTCAAATGAGCCTGAAAACATAATATTCCCATTCCAAGACAACACATATATCTTGCATCCATATGAGAATGATCAGCTGTTTGGATGGGAATACAAAGTAACTCAGGCTATGGCAAGTGAGACAAAGAACCAGGTTTTGCGGATACCGCCAAATACTGGTAAAAGTATACTGAGAGGAAGGAACTCCATTACAATCAAAACACAAGCCAACTTGGATGGATGCAGGTGGACCATCCATACTTATACAAGAGAAAATGGAAGAAAGGAAATATCATTTACCGAAGGATGGTATGCATTTAAGAGAGCAAACAACCTTGCCGAAGGAGATAAATTGCAATTCCAAGTTTCTGATCCAGCCGATGTTATGACTGTCGAGATTGTCCGGGCCAACAATTCAAATTAA 651 0.3917 MASSSTRISNLSQIDWGHKIEGDPVAYLVHPSGNTAWMEFHIDGDNCYMTDGKIVSLLFGIKQPTEVILTYNEHNTTITMRNSSNEPENIIFPFQDNTYILHPYENDQLFGWEYKVTQAMASETKNQVLRIPPNTGKSILRGRNSITIKTQANLDGCRWTIHTYTRENGRKEISFTEGWYAFKRANNLAEGDKLQFQVSDPADVMTVEIVRANNSN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02730 216 CDD B3_DNA 129 211 IPR003340 GO:0003677
Trre7g02730 216 Gene3D - 112 215 IPR015300 -
Trre7g02730 216 ProSiteProfiles B3 DNA-binding domain profile. 114 213 IPR003340 GO:0003677
Trre7g02730 216 Pfam B3 DNA binding domain 121 212 IPR003340 GO:0003677
Trre7g02730 216 SUPERFAMILY DNA-binding pseudobarrel domain 121 211 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02730 Trre-Chr7 23545468 23548425 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre7g02730 B3 2.4e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02730 - K02602 tpra:123909626 155.221