Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02715 ATGATAGCAGAAGAGACAGAAGCAGATAATGAGAGGTTGGAAAAGGATTTGGAGGAAATAAAGCTACAAATTGAAGAACTAAAGAAGATTTTGGTTATACTCATAAAGGATCTTGACATGGGAGGATGGGAAGGTATTGTTGGACAAGTAGCAGTTACTGGAAAGCATCAATGGATCTGTGCGGATAATCAAATTACAAGTTCTGGCCCATCTTTTAAGTTTGCTGATGGATGGAAATCTCAGTTTTCTGCTGGCATAAGGTGTGGTACATAG 273 0.3883 MIAEETEADNERLEKDLEEIKLQIEELKKILVILIKDLDMGGWEGIVGQVAVTGKHQWICADNQITSSGPSFKFADGWKSQFSAGIRCGT 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02715 90 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 44 87 IPR043561 GO:0003700|GO:0006355
Trre7g02715 90 Coils Coil 3 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02715 Trre-Chr7 23325159 23328336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02715 44 87 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 52.273 9.37e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02715 - - gmx:100777740 87.0409