Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02685 ATGGGAGATAGTGAAGATGGTAACAATGAAATGCTTCAGAGACTTCATTCTTCTTCTTCTTCTTCTTTTATGAAACAACAACAACTTAACAATCACATGGAACAATTAAGTATACCTCAGTATAATTCCTCACAAATGAGAACCGTTGGTAGAAATCAGCATCATAATCAAAGGGCAGGTATGCCACCATCACACCCACATCAGATCCCGCCTATTTCACCATACTCTCAGATCCCGGTTTCACGGACGACGCAAATGTCTTCTCATAATACAAGTCCTACACCTTCCCACACTCGATCACTCTCTCAACCGTCTTTTTTCTCTCTCGATTCTCTTCCACCTCTTAGCCCTTGTTCGTTTCGTGAATCTTCGGATACTAACAACAACAACAACAACGCTGACGTGTCAATGGAAGATCGTGACGTCACTTCTCACTCTCCGTTACCTCCGTTTGCTAGAAACCCTTCTTTACCGCCTCGAAAATCGCACCGTCGTTCTAACAGTGATATTCCGTTTGGATTTTCAACTGTTTTGCAGTCTTCTCCGCCGTTGATTCCTCTCAGAGGAAGAGAACTTGGTAAACCTAATTCGTCGGTGGTGAAGAGAGAATTTGAACATAATGTGGAGGAGAAGAAATCTTTATCTCCTGAAGGTGAAGTTGTGGATGATCTTTTTTCTGCTTATATGAATTTGGATAACATTGATGCAATTAACTCGTCTGGGACCGACGACAAGAATGTCACCGTTGATAATAATCGCGATGATTTGGATAGTAGAGCGAGTGGAACAAAGACGAATGGTGGTGATAGTAGTGATAATGAAGCTGAAAGTAGTGTTAATGAGAGTGGGGATAGTATGCAGAGGAAGAGAAGTGCTGGAGGTGATATTGCACCTACTAGTAGACATTATCGGAGTGTGTCGATGGATAGTTTTATTGGGAAATTGAATTTCAATGATGAGTCATTTAAGCTACCACCTTCACCTGGAGGATTGGTTTCTCCAGGTAATTCGGGTGATGGGAATTCCGCGGCTTTTAGTTTGGAGTTTGGGAATGGTGAGTTTAGTGGACCGGAATTGAAGAAAATTATGGCTAATGAAAAACTTGCTGAGATTGCTATGGCTGATCCGAAGCGTGCTAAGAGGATTTTGGCTAATAGGCAATCGGCTGCGCGATCGAAAGAACGCAAGATGCGTTACATTTCAGAGCTAGAACACAAGGTTCAGACTCTGCAGACTGAAGCTACTACACTTTCTGCACAACTTACTCTGTTGCAGAGAGATTCGGTGGGACTCACTAACCAGAATAGTGAGTTGAAGTTCCGCCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTGAATGAGGCGCTTACTGCTGAGGTTCAAAGACTGAAGATAGCTACAGCTGAGCTGAATGGGGAGTCGCATCCTTCTAGCTGCATGATTCCGCAACATTCGGGCAACTCTATGATGTTCCAACAACAGCATCAGCCATCTCAGCAAAACATTCATATTCAACAGCATCAACAACAGCAGCAGCATCAGCAACAACAGCAGAATGGTAATGCCAACTCAAAGAATGAGTTAAAGCAGTAG 1602 0.432 MGDSEDGNNEMLQRLHSSSSSSFMKQQQLNNHMEQLSIPQYNSSQMRTVGRNQHHNQRAGMPPSHPHQIPPISPYSQIPVSRTTQMSSHNTSPTPSHTRSLSQPSFFSLDSLPPLSPCSFRESSDTNNNNNNADVSMEDRDVTSHSPLPPFARNPSLPPRKSHRRSNSDIPFGFSTVLQSSPPLIPLRGRELGKPNSSVVKREFEHNVEEKKSLSPEGEVVDDLFSAYMNLDNIDAINSSGTDDKNVTVDNNRDDLDSRASGTKTNGGDSSDNEAESSVNESGDSMQRKRSAGGDIAPTSRHYRSVSMDSFIGKLNFNDESFKLPPSPGGLVSPGNSGDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIAMADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELNGESHPSSCMIPQHSGNSMMFQQQHQPSQQNIHIQQHQQQQQHQQQQQNGNANSKNELKQ 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02685 533 Gene3D - 376 428 - -
Trre7g02685 533 MobiDBLite consensus disorder prediction 238 301 - -
Trre7g02685 533 MobiDBLite consensus disorder prediction 475 533 - -
Trre7g02685 533 MobiDBLite consensus disorder prediction 74 137 - -
Trre7g02685 533 MobiDBLite consensus disorder prediction 261 287 - -
Trre7g02685 533 Coils Coil 393 427 - -
Trre7g02685 533 SMART brlzneu 373 437 IPR004827 GO:0003700|GO:0006355
Trre7g02685 533 MobiDBLite consensus disorder prediction 168 182 - -
Trre7g02685 533 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 97 529 - -
Trre7g02685 533 MobiDBLite consensus disorder prediction 11 59 - -
Trre7g02685 533 MobiDBLite consensus disorder prediction 1 198 - -
Trre7g02685 533 SUPERFAMILY Leucine zipper domain 377 428 IPR046347 GO:0003700|GO:0006355
Trre7g02685 533 Coils Coil 456 476 - -
Trre7g02685 533 CDD bZIP_plant_RF2 378 427 IPR044759 GO:0003700|GO:0006355
Trre7g02685 533 FunFam probable transcription factor PosF21 376 429 - -
Trre7g02685 533 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 375 438 IPR004827 GO:0003700|GO:0006355
Trre7g02685 533 Pfam bZIP transcription factor 377 431 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02685 Trre-Chr7 22843332 22846159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02685 1 496 bZIP Transcription Factor Family AT4G38900 56.985 2.94e-166 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre7g02685 bZIP_1 5.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02685 - - tpra:123913993 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02685 7 22843332 22846159 Trre7g02685 7 22843332 22846159 ECH