Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02684 ATGGCCGCACCTCAATCTCTCTCCCTCTCCAAACCCTCCCCTCTCTCTCCCCCTCCCCCTCTCACCCCCCGCTTCTTCTCTAAACCCTATCTCCCTTCTTTCCACTCCGACACCCCACGAAAACCCCTTTTCATCACTTCCTCCAAAAACCCAATTTCCGACATCATCCTCTCCAACAAACCCAAACCATCTCATCAAAACGACGACGATAAGCCTCGTGAAGAGTGTGGCGTTGTTGGAATCTACGGTGACTCAGAAGCTTCACGGTTATGCTACTTAGCTCTACACGCTCTCCAACACCGTGGTCAAGAAGGTGCTGGAATTGTCACTGTTAACAATAACGTTCTTCAATCAATCACCGGTGTTGGTCTCGTTTCCGATGTGTTTAACGAATCAAAGCTCGATCAGTTGCCTGGAAGTTTAGCTATTGGTCATGTTCGTTACTCTACTGCTGGTCAATCTATGTTGAAAAATGTTCAACCTTTTGTTGCTGGGTATCGTTTTGGTTCTGTTGGGGTTGCTCATAACGGTAATTTGGTTAATTATCGTACTTTAAGAGCTGGATTAGAAGAAAAAGGTTCCATTTTTAATACTACTTCTGATACTGAAGTTGTTCTTCATTTGATTGCTACTTCAAAGCATAGACCTTTTATTTTGAGAATTGTTGATGCTTGTGAGAAGCTTGAAGGAGCTTATTCAATTGTGTTTGTTACTGAAGATAAACTTGTTGCTGTTAGAGATCCTTATGGGTTTAGGCCTTTGGTTATGGGTAGGAGAAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGGGAAGTTTTCCCTGGTGAGGTTATTGTGGTGGATAATAATGGGATTCAATCACTTTGTCTTATGTCTCATCCGCAGCCGAAGCAGTGTATCTTTGAGCATATTTACTTTGCTTTGCCTAATTCTGTTGTTTTTGGTAGGTCTGTTTATGAATCGCGGAGCCGATTTGGGGAGATACTTGCTACGGAGAGTCCTGTTGATTGTGATGTTGTGATAGCAGTTCCTGATTCTGGTGTTGTGGCTGCACTTGGTTATGCTGCGAAAGCTGGTGTTCCTTTTCAGCAAGGGTTGATTAGGTCACACTATGTAGGAAGGACTTTCATTGAGCCGTCTCAATCAATTAGGGACTTTGGTGTCAAGTTGAAGCTTTCCCCCGTTCGTTCTGTACTTGAAGGTAAAAGGGTTGTTGTTGTTGATGATTCGATTGTGAGAGGAACAACATCATCGAAGATTGTGAGGTTGCTTAAAGAAGCTGGTGCAAAAGAAGTTCATATGAGAATTGCAAGTCCTCCGATTATCGGTTCTTGTTATTACGGTGTTGATACACCTAGCTCAGAGGAGTTGATATCTAATAGGATGAGTGTTGATGAAATAAGGGATTTTATAGGATCAGATTCACTTGCTTTTCTTCCATTTAACAGCTTGCATGATATGTTGGCCGAGGACTCTCCTAATTTTTGTTACGCTTGTTTCTCTGGGAAATACCCGGTCGAGCCAAGAGAGCTTAAGGTTAAGAGGGTTGGTGACTTTGTTGATGATGGTTTGAATGGAAGTTTGGAACAAATTGATGGTGGTTGGGTTCAAGCTAACCGAAATACGAAAGAGGATTTACTTGGGAAAAAAGCAAGTTTATAA 1698 0.4223 MAAPQSLSLSKPSPLSPPPPLTPRFFSKPYLPSFHSDTPRKPLFITSSKNPISDIILSNKPKPSHQNDDDKPREECGVVGIYGDSEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAGLEEKGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPYGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVIVVDNNGIQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRSRFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQSIRDFGVKLKLSPVRSVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVDEIRDFIGSDSLAFLPFNSLHDMLAEDSPNFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLEQIDGGWVQANRNTKEDLLGKKASL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02684 565 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 76 295 IPR017932 -
Trre7g02684 565 CDD PRTases_typeI 338 449 IPR000836 -
Trre7g02684 565 MobiDBLite consensus disorder prediction 11 26 - -
Trre7g02684 565 Pfam Glutamine amidotransferase domain 154 273 IPR017932 -
Trre7g02684 565 SUPERFAMILY PRTase-like 311 522 IPR029057 -
Trre7g02684 565 CDD GPATase_N 76 326 IPR035584 -
Trre7g02684 565 NCBIfam amidophosphoribosyltransferase 76 517 IPR005854 GO:0004044|GO:0009113
Trre7g02684 565 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 74 523 - -
Trre7g02684 565 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 76 517 IPR029055 -
Trre7g02684 565 Hamap Amidophosphoribosyltransferase [purF]. 75 516 IPR005854 GO:0004044|GO:0009113
Trre7g02684 565 Pfam Phosphoribosyl transferase domain 350 445 IPR000836 -
Trre7g02684 565 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 76 299 IPR029055 -
Trre7g02684 565 MobiDBLite consensus disorder prediction 1 28 - -
Trre7g02684 565 Gene3D - 335 499 IPR029057 -
Trre7g02684 565 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02684 Trre-Chr7 22836171 22838897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02684 69 549 PRT Gene Family AT4G34740 85.892 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02684 K00764 - gmx:100791919 934.865