Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02656 ATGGGTGAATTTCCGAGTAGTGGTTCAATGGATAGTTTTTTCGATGAGCTTTTGAAAGATTCGCACGCTTGTACTCACACTCACACGTATGATCAGGTTGGTACTGATGATACTGCTGAATCTGAGAAGAAATCGAAGAAACGGCCTGTGGGTAATAAAGAAGCGGTTAGGAAGTATCGTGAGAAGAAGAAAGCTAGGGCTGCGTCGTTGGAAGATGAGGTTATGAAATTGAGGGCTTTGAATCAGCATTTGATGAGGAAGTTGCAGGGACAGGCTGCTTTGGAGGCTGAAGTTGCTAGATTGAAGTGTTTGTTGGTTGATATTAGGGGAAGGATTGAAGGAGAAATTGGATCGTTTCCGTATCAGAAACCGACCAATGCTAACCCTCCGGTTCAGAATTTGACCGGTTCTTATGTGATGAACCCTTGTAATGTGCAGTGTGATGATCGCGTCTATTGTCTTCGTCCTGGAGCAGATGGGACGATTGCTGCAGAAGGGGCGTCACCAAATGAGGGAGGATTTGATGGTTGTGAATTTGAGAATCTCCAGTGTCTGGCAGGCGAGAAATTTGGGCTCAAGGATCTTAATGGTTGTGGAGTTGGGCCGACAGTGTCTAATGTCAATTCTCAAGCTTCCAATAAAAGAAAAGGGGGTGCTCGTGCAGCAAAAGCAGGGTGA 678 0.4558 MGEFPSSGSMDSFFDELLKDSHACTHTHTYDQVGTDDTAESEKKSKKRPVGNKEAVRKYREKKKARAASLEDEVMKLRALNQHLMRKLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKPTNANPPVQNLTGSYVMNPCNVQCDDRVYCLRPGADGTIAAEGASPNEGGFDGCEFENLQCLAGEKFGLKDLNGCGVGPTVSNVNSQASNKRKGGARAAKAG 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02656 225 SMART brlzneu 39 107 IPR004827 GO:0003700|GO:0006355
Trre7g02656 225 MobiDBLite consensus disorder prediction 28 62 - -
Trre7g02656 225 CDD bZIP 46 99 - -
Trre7g02656 225 SUPERFAMILY Leucine zipper domain 44 90 IPR046347 GO:0003700|GO:0006355
Trre7g02656 225 Pfam Basic region leucine zipper 41 97 IPR004827 GO:0003700|GO:0006355
Trre7g02656 225 MobiDBLite consensus disorder prediction 33 58 - -
Trre7g02656 225 Gene3D - 33 108 - -
Trre7g02656 225 Coils Coil 53 87 - -
Trre7g02656 225 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 42 89 IPR004827 GO:0003700|GO:0006355
Trre7g02656 225 PANTHER CCAAT/ENHANCER BINDING PROTEIN 20 120 IPR031106 GO:0003700|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02656 Trre-Chr7 22302349 22304025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02656 2 224 bZIP Transcription Factor Family AT2G16770 58.537 4.47e-90 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre7g02656 bZIP_2 1.9e-13 CL0018