Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02655 ATGACAGTTGAAAACAGAATTGTTCTTGTTGGGATTAGAATAGATAGCCAAAGTAGACAGCTTCTTAATTGGGCTATTATTAAAGTTGCTCAACCTGGTGATTGTGTTATTGCTATACATGTAGTTAAAACTAAAACTTCAGATTATGTTTCCAAAAGCAAGAGCCTTATAGATGGCTATTTAGAGGTTTATGAAGGCTTATGTGATGTGAAGAAGGTTGGTCTTTCTGGTCAAATCTTAACTGGAAAGTCCATTAAAGATATTCTTGTTAGAGAAGCAAAAAACCAGGGTGCTTTGGCTCTAGTGGTAGGGGGTAAATCTGCCACAGCTAAATATTGCGCCAAACGGCTTCCACCCACCATCAATGTTCTGGCCATCCAAGATTCAAGGATTGTCTTTGGGAGGTGTCACAATAAACAACCATCAGGTAATCTTATATTGGATTCAAGTCCAAGTTTAACAAGCATAGATAACCTGAATGACAGAATAATCCAATCTGAATTTGGTTTTCCCGTGGTGGAGAGTGAGAAATCGCCACGCCAAATTACCAAGGAATCGAAAGAAGAAACACTTGAGGAATCAGAAAAGTACAAGTCACGGTCGATATCCATGTTTGTAGGCGATCCTTTTGAGCAGAAGCTTGGATGGCCTCTACTTCGCCGAGCAGATTCAGAAATCTCACAAAGCCGACATGGAAGGGACATGTCTGTAGTACAATGGGTAATGACCTTTCCAGATCGTTCGCCACATAGTAGTTCTCAATCATCTTCAAGCGACGAAAATCTATTTGACAGGAGCATCAGTGAAATTGAGGATGAGAGCTTAAAAAATTATTCACCTCCATCTGTTCTACTACCAAAAGGCCTAGAAGGGATATTAAATATAAATTCACTTAATTGCAAGTGGTTTAGTCTTGAGGCTCTCAAGTCCTGCACTAGCCAATTCTCTTCAGAAAACTTGATCGGGAAAGGCGGGAGCAACCGTGTGTACAAAGGAGTACTACCTGATGGAAAGCCAATTGCAGTTAAAGTATTGAAGTCATCAAAAGAAGCATGGAAAGATTTTGCCTTTGAAGTGGAAATAATATCCTCATTAAAGCACAAAAACATTACTCAGTTGCTTGGAATTTGCATAGAGGACAATACTTTAATATCTGTTTATGATTATTTCCCTAAAGGCAGCTTAGAGGCAAATCTACATGGAAAGAACAAGGATGGATCCCTTTTATCATGGGAAGTGAGATTTAATGTAGCTGTTGGAATCGCCGAGGCGCTTGATTACCTTCACACAGAAGCTTTGAAGCCTGTTATACACAGAGATATCAAGTCTTCAAACATTCTTCTTTCCAAGGAACTTGAGCCACAATTGTGTGATTTTGGACTTGCAATATGGGGACCAACAACTTCATCCTTTTTGACAAAACAAGATGTAGTAGGAACATTTGGTTACCTTGCTCCTGAATACTTCATGTATGGAAAAGTCAGCGATAAGATCGATGTCTATGCTTTTGGCGTTGTATTACTTGAACTAATATCAGGTAGGGAACCAATCAGCTCTGAATCTTGCAAAGGACAGGAGAGCTTGGTAGCTTGGGCAAAACCATTAATAGAGAGTGGAAATATCAAAGGTTTGTTAGACCCAAAATTAGAAGGGAAGATTGATGAGACGCAAATGCAAAGAATGGTTTTAGCAGCATCTTTATGTATCACACGAGCTGCTAGACTTCGTCCTAAATTTAATCAGATATTGAAGATCCTAAGAGGGGGTGATGAAATTGAATATTGCTTCAATGAACATTCAGAGAATGAAGGAAACATTGATGATGAAGTGTATCCAAATTCAAGTACAGAGTTACATCTAACTCTTGCATTACTTGGTGTTGATGAGGATAGTACATCATCTTCAAGTAGTACAGACCACAGCTATAGTGAAAACTTGAAAGACCAATGGAGCAGCAGGTCTTCAAGTTTTAATTAA 1977 0.389 MTVENRIVLVGIRIDSQSRQLLNWAIIKVAQPGDCVIAIHVVKTKTSDYVSKSKSLIDGYLEVYEGLCDVKKVGLSGQILTGKSIKDILVREAKNQGALALVVGGKSATAKYCAKRLPPTINVLAIQDSRIVFGRCHNKQPSGNLILDSSPSLTSIDNLNDRIIQSEFGFPVVESEKSPRQITKESKEETLEESEKYKSRSISMFVGDPFEQKLGWPLLRRADSEISQSRHGRDMSVVQWVMTFPDRSPHSSSQSSSSDENLFDRSISEIEDESLKNYSPPSVLLPKGLEGILNINSLNCKWFSLEALKSCTSQFSSENLIGKGGSNRVYKGVLPDGKPIAVKVLKSSKEAWKDFAFEVEIISSLKHKNITQLLGICIEDNTLISVYDYFPKGSLEANLHGKNKDGSLLSWEVRFNVAVGIAEALDYLHTEALKPVIHRDIKSSNILLSKELEPQLCDFGLAIWGPTTSSFLTKQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSESCKGQESLVAWAKPLIESGNIKGLLDPKLEGKIDETQMQRMVLAASLCITRAARLRPKFNQILKILRGGDEIEYCFNEHSENEGNIDDEVYPNSSTELHLTLALLGVDEDSTSSSSSTDHSYSENLKDQWSSRSSSFN 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02655 658 MobiDBLite consensus disorder prediction 629 658 - -
Trre7g02655 658 Pfam Protein kinase domain 316 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02655 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Trre7g02655 658 MobiDBLite consensus disorder prediction 178 194 - -
Trre7g02655 658 Gene3D Phosphorylase Kinase; domain 1 290 389 - -
Trre7g02655 658 Gene3D Transferase(Phosphotransferase) domain 1 390 599 - -
Trre7g02655 658 ProSiteProfiles Protein kinase domain profile. 315 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02655 658 CDD USP_Like 8 118 - -
Trre7g02655 658 FunFam Putative receptor-like serine/threonine-protein kinase 390 602 - -
Trre7g02655 658 MobiDBLite consensus disorder prediction 175 194 - -
Trre7g02655 658 SUPERFAMILY Protein kinase-like (PK-like) 296 586 IPR011009 -
Trre7g02655 658 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 284 389 - -
Trre7g02655 658 PANTHER OS08G0249100 PROTEIN 177 622 IPR046958 -
Trre7g02655 658 SMART serkin_6 315 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02655 658 CDD STKc_IRAK 321 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02655 Trre-Chr7 22283921 22287766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02655 303 647 Trihelix Transcription Factor Family AT1G70460 40.571 4.40e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Trre7g02655 Pkinase 5.1e-43 CL0016