Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02643 ATGCCTCAATGCCCAGCATGTCGAAGACGGGGCCAGTCTAGCCGCCCCTGTTTCTTGGGTCCTTTTTTTCCGACTGAACTTTCGTACACGTATGTTCACCAAGTCTTTGGTTATTGTCGGATACTTAATTGGATGACTGTTGCTCCAGCTGGGAGGCGGCAGCTACTTGTTCGTGCCCTCCGCTGGGAGGCACAACAAAGGATAGAAAACGGCGAAGGTGGGGCTTATCGGGCCTTTATGCGAAAAAGGCGTCGACTCCGACAAACTAGAGAACTGCTGAATGGAAGAATAGCACAAGTAGAAGCTCTGCAGGCTACTATTCAGGGACTTGAAACTAACATTGCTACATTGCAAGCCCAACTAAATGGTCACCCAAATGACAACTAA 387 0.491 MPQCPACRRRGQSSRPCFLGPFFPTELSYTYVHQVFGYCRILNWMTVAPAGRRQLLVRALRWEAQQRIENGEGGAYRAFMRKRRRLRQTRELLNGRIAQVEALQATIQGLETNIATLQAQLNGHPNDN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02643 128 ProSiteProfiles LOB domain profile. 2 100 IPR004883 -
Trre7g02643 128 Coils Coil 83 120 - -
Trre7g02643 128 Pfam Lateral organ boundaries (LOB) domain 3 91 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02643 4 120 AS2 family AT5G63090 26.016 1.16e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trre7g02643 LOB 9.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02643 - K10362 mnt:21406245 51.9878