Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02612 ATGGGAATAATCTCCGATACCCCTTCAGTTTCCACCGCCACAAAATGGCTCGGTTTTGTAGCTGCGATTTGGATTCAATCCATCTCCGGCAACAACTACACATTCTCAAACTACTCTGATGCTCTCAAATCTCTTATGCACCTCACCCAATTACAGCTCAACAACCTCTCCGTCGCTAAAGACGTCGGTAAAGCTTTCGGCCTTCTCGCCGGACTTGCCTCCGACCGTTTACCCACTTGGGCCATTCTCCTCATTGGTTCCCTCGAAGGTCTCATCGGTTATGGCGTTCAATGGCTCGTCGTTGGTCAAATCATTCAACCCCTTCCTTACTGGCAGATGTGTGTGTTTTTGTGCATGGGAGGGAACAGTACAACATGGATGAACACAGCGGTTTTAGTGACATGCATAAGAAACTTCCGGCGAAACAGAGGACCAGTTTCAGGGATTCTAAAAGGCTATGTTGGTTTAAGCACTGCAATTTTCACGAATCTTTGTTCTGCTTTAGTAGCAGATGACCCTGCTTTTTTTCTTCTAACACTAGCTCTTGTACCTTTTATCGTTTGTCTCACCGGAGTATTTTTTCTCCGTGAAGTTCCCGTCGCTAAAGTAACCACCGTAGCAGAAGATAACGAAGAAGGGAAGTATTTCGGCATCTGTAATGCCGTCGCCGTTGTTCTCGCCGTTTATCTTTTAGCTTATGGTTTTGTACCAAATGCTAATACATTAGTATCACGTGTTTTCGTTGCGGTTTTGCTTGTTCTGTTGGCGTCACCGTTGGGAATTCCGGTGTATGCATATTTCAAAGGGAGAAATTCGGGTCGGGTCGGAGGTGATGTTGAGGGACAAAGGGTAACAGAACCGTTGATTCAGAATAGGGAAAAGGAAAGTGAGACGGTTACGGATGCCATGGTGGCGGAGACGGAGGTGGTGGTTGTAAAAGGACAACCGGCAATTGGGGAAGAACATATGATAATGGAAGTAATGAAGAGTTTGGATTTTTGGATCTTGTTTGTTTCGTTTCTATGTGGAGTTGGAACCTCTACTAATGCGGGTGGGGTTCCAGAAGTGGTAGCAGTTATGAATAATATGGGTCAAATCGGGTTGGCTCTCGGGTATACGGATGTATCCATATTTGTTTCGTTAACTAGTATTTTTGGATTTTTTGGAAGGATTGTATCTGGTTCCGTTTCAGAGCATTTCATCAAGAAATCTGCAACGCCTAGACCTCTTTGGAATGCAATATCTCAAATTCTAATGGCTGTGGGCTACATACTTCTAGCCATGGCTATGCCCGGCTCACTTTACATCGCTTCTATTATAGTCGGCATATGTTATGGAGTGCGTCTTGCTATTACAGTCCCAACAGCCTCCGAGTTATTTGGACTCAAATACTATGGTCTCATCTACAATATTCTCATCCTCAATCTTCCACTTGGATCTTTCCTCTTTTCCGGGCTACTTGCCGGCATACTCTATGATATGGAAGCAACGACAACAGAAGGAGGAGGAAACACGTGCGTTGGAGGTCATTGTTATAGGCTAGTGTTTATAGTCATGGCAGGAGCATGTGTTGTTGGGTTCTTCTTAGACATTTTATTGGCAATTAGAACCAAAACTCTCTACAACAAGATTTGCATGAGTAAGAAATCGAAGAAATCCTCCGTGACATCAAGTAGCCAATGA 1683 0.4427 MGIISDTPSVSTATKWLGFVAAIWIQSISGNNYTFSNYSDALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLASDRLPTWAILLIGSLEGLIGYGVQWLVVGQIIQPLPYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTNLCSALVADDPAFFLLTLALVPFIVCLTGVFFLREVPVAKVTTVAEDNEEGKYFGICNAVAVVLAVYLLAYGFVPNANTLVSRVFVAVLLVLLASPLGIPVYAYFKGRNSGRVGGDVEGQRVTEPLIQNREKESETVTDAMVAETEVVVVKGQPAIGEEHMIMEVMKSLDFWILFVSFLCGVGTSTNAGGVPEVVAVMNNMGQIGLALGYTDVSIFVSLTSIFGFFGRIVSGSVSEHFIKKSATPRPLWNAISQILMAVGYILLAMAMPGSLYIASIIVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFIVMAGACVVGFFLDILLAIRTKTLYNKICMSKKSKKSSVTSSSQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02612 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 542 - -
Trre7g02612 560 CDD MFS_Mch1p_like 15 526 - -
Trre7g02612 560 Pfam Nodulin-like 15 263 IPR010658 -
Trre7g02612 560 SUPERFAMILY MFS general substrate transporter 33 538 IPR036259 -
Trre7g02612 560 Gene3D MFS general substrate transporter like domains 325 539 IPR036259 -
Trre7g02612 560 Gene3D MFS general substrate transporter like domains 12 207 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02612 Trre-Chr7 21572608 21575351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02612 13 553 Nodulin-like Gene Family AT4G34950 68.028 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02612 - - gmx:100807372 783.097