Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02609 ATGGTTCTGGTTGATGAGAGGGGGGGGAAGATTCACGCATCCATAAGGAGACAGTTGTTGTACATGTTTGAGTCTAAAATTGAGGAAGGGGAGGTGCAGCATGTGAAGACTTCTGATATCAGTCATTATGGGCTTACACTGTCAAATTTGGCTGAAGTTTGTAGTCATAGCCATGACTATGAATTTTTAGTTGATGTGATTGGCTTAATGACTGGTATATCTCCTGAGAGGGAATATGTTCGGGATGGGAAAATAACAAAAATGGTTGTGATTGAGCTGACTGATGCTAGTGGGAAATGTGATTGCGCTCTGTTCGGTGACTATGTTGGTGAGCTTAATAAGAAAATGGGCAAAGCTGGAGAAGGACTTCCTGTTGTTGTTATCCAGTTTGCTAAAGTTAAGATATTTAGAGACCAAGCATCTATTCAAAATGTTAACAACACTACTAGGATTTTCGTAAATCCAGACATTCCTGAGGCTCATCAATTCAAGGATAGCATTGCTGTTCATGGGATTGAGCTGGATTCCAACGTATCTATAATTGGTGGAGGAGCTAAGCCTTCAATGGATGAAGAGTTTCTTCGGATGCATTCTCGAAAGACAGTTGCTGAGTTGAAGAATTTGGAGGAAGATGGTGTCTTCACCGTTTATGGGGTTATAGTACCTAGGTTTAGGGTCAAGGTGGAAGTATCTGATGGTGGTTCTACGTGTGTGTTTGTGATATTTGATTCTGATATGAGCTATATCCTTGAGAAGTCTTGCGCTCACTTTGTTGGAAAATCTAAGGCCCTTGTCGGTAAGAAAATGTTGTTTGTTGTTGATAAGGGATTGAACCATACAAAAATTGTTGATGGAACCTTTAGGGTGAAGCGTGTTTGCTTTGATTCGCAAATTATTGAGGCCTTTTGTACTGAGGGATCATTTTTTACCCCTGTCAAGCCTACCTCTCCACTGATTGATATTGAATCCGATGGCCATAATAATGAAGTTGACTATGTGTTGGATTCTCAGCCTCTTGGCTTCACGAAGGATACAATTGTCTCACCTCCTAGGAAACCTAAGAGCCCTCTTAATGAAGATGTTCTTCTGGGCACTGTGAAGAGGAATTTGGCTGAGGCCTTTGATGGTGTTTCCAAGTCTGAAAATAGGAAAAGCCTTAGGCGTGTTAAGGTTGAGAAGGAATAG 1185 0.4118 MVLVDERGGKIHASIRRQLLYMFESKIEEGEVQHVKTSDISHYGLTLSNLAEVCSHSHDYEFLVDVIGLMTGISPEREYVRDGKITKMVVIELTDASGKCDCALFGDYVGELNKKMGKAGEGLPVVVIQFAKVKIFRDQASIQNVNNTTRIFVNPDIPEAHQFKDSIAVHGIELDSNVSIIGGGAKPSMDEEFLRMHSRKTVAELKNLEEDGVFTVYGVIVPRFRVKVEVSDGGSTCVFVIFDSDMSYILEKSCAHFVGKSKALVGKKMLFVVDKGLNHTKIVDGTFRVKRVCFDSQIIEAFCTEGSFFTPVKPTSPLIDIESDGHNNEVDYVLDSQPLGFTKDTIVSPPRKPKSPLNEDVLLGTVKRNLAEAFDGVSKSENRKSLRRVKVEKE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02609 394 CDD RPA1_DBD_B_like 65 166 - -
Trre7g02609 394 SUPERFAMILY Nucleic acid-binding proteins 49 174 IPR012340 -
Trre7g02609 394 Gene3D - 215 297 IPR012340 -
Trre7g02609 394 Gene3D - 38 174 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02609 Trre-Chr7 21565077 21567407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02609 63 206 Core DNA Replication Machinery Family AT2G06510 28.378 5.68e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02609 - - tpra:123904946 413.305