LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g02608	ATGGTTCTGGTTGATGAGAGGGGGGGGAAGATTCACGCATCCATAAGGAGACAGTTGTTGTACATGTTTGAGTCTAAAATTGAGGAAGGGGAGGTGCAGCATGTGAAGACTTCTGATATCAGTCATTATGGGCTTACACTGTCAAATTTGGCTGAAGTTTGTAGTCATAGCCATGACTATGAATTTTTAGTTGATGTGATTGGCTTAATGACTGGTATATCTCCTGAGAGGGAATATGTTCGGGATGGGAAAATAACAAAAATGGTTGTGATTGAGCTGACTGATGCTAGTGGGAAATGTGATTGCGCTCTGTTCGGTGACTATGTTGGTGAGCTTAATAAGAAAATGGGCAAAGCTGGAGAAGGACTTCCTGTTGTTGTTATCCAGTTTGCTAAAGTTAAGATATTTAGAGACCAAGCATCTATTCAAAATGTTAACAACACTACTAGGATTTTCGTAAATCCAGACATTCCTGAGGCTCATCAATTCAAGGATAGCATTGCTGTTCATGGGATTGAGCTGGATTCCAACGTATCTATAATTGGTGGAGGAGCTAAGCCTTCAATGGATGAAGAGTTTCTTCGGATGCATTCTCGAAAGACAGTTGCTGAGTTGAAGAATTTGGAGGAAGATGGTGTCTTCACCGTTTATGGGGTTATAGTACCTAGGGTCAAGGTGGAAGTATCTGATGGTGGTTCTACGTGTGTGTTTGTGATATTTGATTCTGATATGAGCTATATCCTTGAGAAGTCTTGCGCTCACTTTGTTGGAAAATCTAAGGTTCCAAACGATGGTTCATTTCCTGTTGAATTTCAGGCCCTTGTCGGTAAGAAAATGTTGTTTGTTGTTGATAAGGGATTGAACCATACAAAAATTGTTGATGGAACCTTTAGGGTGAAGCGTGTTTGCTTTGATTCGCAAATTATTGAGGCCTTTTGTACTGAGGGATCATTTTTTACCCCTGTCAAGCCTACCTCTCCACTGATTGATATTGAATCCGATGGCCATAATAATGAAGTTGACTATGTGTTGGATTCTCAGCCTCTTGGCTTCACGAAGGATACAATTGTCTCACCTCCTAGGAAACCTAAGAGCCCTCTTAATGAAGATGTTCTTCTGGGCACTGTGAAGAGGAATTTGGCTGAGGCCTTTGATGGTGTTTCCAAGTCTGAAAATAGGAAAAGCCTTAGGCGTGTTAAGGTTGAGAAGGAATAG	1215	0.4115	MVLVDERGGKIHASIRRQLLYMFESKIEEGEVQHVKTSDISHYGLTLSNLAEVCSHSHDYEFLVDVIGLMTGISPEREYVRDGKITKMVVIELTDASGKCDCALFGDYVGELNKKMGKAGEGLPVVVIQFAKVKIFRDQASIQNVNNTTRIFVNPDIPEAHQFKDSIAVHGIELDSNVSIIGGGAKPSMDEEFLRMHSRKTVAELKNLEEDGVFTVYGVIVPRVKVEVSDGGSTCVFVIFDSDMSYILEKSCAHFVGKSKVPNDGSFPVEFQALVGKKMLFVVDKGLNHTKIVDGTFRVKRVCFDSQIIEAFCTEGSFFTPVKPTSPLIDIESDGHNNEVDYVLDSQPLGFTKDTIVSPPRKPKSPLNEDVLLGTVKRNLAEAFDGVSKSENRKSLRRVKVEKE	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g02608	404	SUPERFAMILY	Nucleic acid-binding proteins	49	174	IPR012340	-
	Trre7g02608	404	Gene3D	-	38	174	IPR012340	-
	Trre7g02608	404	CDD	RPA1_DBD_B_like	65	166	-	-
	Trre7g02608	404	Gene3D	-	215	307	IPR012340	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g02608	Trre-Chr7	21565077	21567407	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre7g02608	63	206	Core DNA Replication Machinery Family	AT2G06510	28.378	5.71e-08	52.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g02608	-		-	tpra:123904946	422.165