Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02587 ATGGCGGATAGCGTGGTTTCATTCCTTTTAGGACATTTATCCCAATTGCTTCAAAATGAAGCTAACTTATTGTGTGGAGTGGACGACAGAATCATATCCCTCCGCAATGAACTCGAAATCATAAACGTCTACCTCAAAACTTCCTCTAAAGGGAAGAACAACAACAAAGAAATAGAACAAATTGTTCTGAGTCAAATCAGAGATGTTGCCCACCTAGCCGAGGATGTCATCGACACATTTATTGTCAATGTCGCCATCTACAAGAGAAGAAACATGATGGGAAGAATGCTTCACAGCTTTGATCATGCAAAGTTACTCCGTGACGTTGCACAGAAAATTGATAAGATCAAAACCACACTCAAAGAGATACGTGAAAACAACATCAACTACAACCAAGAAAGCAATAATCAATCAACATCTGCAACAGATGAGGAAGAGAGGAAACAATCAGTGCAAAGATTAAGAAGAAATGTGGAGGAGGAAAATGTAGTGGGATTTGTCCATGAATCTAAAGTAGTTATCAATAGACTCATAGAGGGTGATTCTCGGCGTCTCAATGTCCTTTCAGTCATTGGTATGGGTGGACTCGGCAAAACAACTCTTGCACGAAAGGTCTACAATAGTGACGAGGTCAAGAAGCACTTCAACTGCCGTAGCAGCAGCAACAAAATCAAAAAGAAGGGTAAGAAGAAACACAAGGAAGCTGTGAATAATTCTCAAGACACCTCTAGCTTAAGTGATGACGAGCTTAAGAAAAGATTGTGGGAATACTTGGAGTGCAAAAAGTATTTGCTTGTTCTTGATGACTTGTGGAAAATACAAGATTGGGATGAGTTAAAAGATGCTTTTCCCGATGGAAACAGAGGAAGCAGAATACTGATAACTAGTCGTTTGAAAGATGTTGCTTCGCATACCAGTCGAGATCCTCCTTACCTCCTTCAATTTCTCAATGAAGAACAAAGTTGGGAGCTCTTCTCCAAAAAAGTGTTTAGAGGAGGAGAAGAGTACTCTTGTGATCTTGAATCTGTTGGTAAACAAATCGTTAAAAGTTGTAGAGGTTTGCCATTATCAATTGTGGTGCTAGCAGGACTACTAGCAAACAAAGAAAAGTCACACAGAGAATGGTCCAAAGTGTTGGGTCATGTTAATTGGTATCTTACTCGAGATGAGACTCAAGTCAAGGATGTGGTACTTAAACTCAGTTTCGACGACTTGCCTTCAAGATTAAAACCGTGTTTTCTGTATCTAGGGATATTCCCCGAAGATTCCGAAATACGTGTAAGGCAATTGTTGCAGCTATGGGTTGCGGAAGGATTTATTCAAGAAACAGGTAGCAGAGATGCATATGATGTTGCTGAAGACTATTTGTATGAGCTCATTGATCGTAGTTTGGTCCAAGTAGCACGAGTTAAGATCAATGGAGGTGTGAAAACATGTCAAATTCACGATCTTCTCAGAGATCTCTGCATATTAAAGAGCCAAGAGGACAAGATCTTCGAAATTTGTACAGATACCAATATTTTAATCCCGACAAAACCTCGTAGATTATTTGTCCATTCTACAATGTCTCACTTTGTTTCCTCAAGCACCAAAGACCATTCATGTGTACGATCTTTGTTTTGCTCTGATCCAAACCTTTTTGTTGCTAGAGGCTTCAAATTGGCTCAGGTTGCTAGCGAAGAGTGGAAATTGCTTACCAAAGGTTTCAAACTGGTTCGGGTATTGAATCTTGAGGGAAGGGATTTTTCCAAAATTCCTTCCAATTTGGGGAACTTCATTCATTTGAGGAGCTTAAGAATAGACTCAAACTACATCCAAAGCGTTCCGGATTCTATATGCAACCTTCAGAATCTACAAACACTAGACATTGGACCTTCAACTATGACCTTCAGAATCTACAAACACTACCCAATTTCATTTCCATATGAAATATCAAAGCTCAAGCATCTAAGACATGTGTATACTTATAGGCCTATAAAGCTACGTTTCAATAGTTCCAAATCAAATGGTGAAGTTATGTGGCACCTTCAAACAATTGGTTTCATTGCACTTGATAAAAAAACAACATATCTCGTGGAGAAAGCAAGTTTCCCTAAACTAAAAACATTACGTTTGTGTATCTCCTCAGACTTCAAAGGTGATGCACCCAAAATGTTGCTAAGCTTACAACAATTGAAGCATTTGAATAAGCTAGCAATTTATATGGAATGGGAAGCCAATTATAAGCTATTGAAAGTATTGCAAAGTCTGAAGCACATAACGCATTTGAAAATACTAAAAATTATAATCAATGACCTCAAATTTGTAACCTCTGCACCCATGTTTCCTCCCAACATTACCAAGTTAACATTGTCACATTTTAGGTGCTTGAATGATGCAGGTATGAAAGCTATTGGAAGTCTCACCAAACTCCAGGTTTTGATCTTAATTGGAAAGGAATGGTGTGCAAATACGTATTTGGTTCTTAATTGTGTTGAAGATGGGTTCCCACAATTAAAAGAGTTTCAGATGAAAACTTTGCAGGTTCGAAACTGGAAATTAGCCAATGGTTCGATGCCACGCCTTCAAACTCTTGTTATTGACACTTGTTATCACTTGGATAGCCTCCCAAGTGAACTGTGGTCTTTGACTACCTTGAGAAAAGTACATGTTTGTAAACCCTCTAATGCAATAGCTAGGTTGTTACAAGATTTGGAAGTTAATAATAGATGTGAGCTCATTGTAGAATAA 2730 0.385 MADSVVSFLLGHLSQLLQNEANLLCGVDDRIISLRNELEIINVYLKTSSKGKNNNKEIEQIVLSQIRDVAHLAEDVIDTFIVNVAIYKRRNMMGRMLHSFDHAKLLRDVAQKIDKIKTTLKEIRENNINYNQESNNQSTSATDEEERKQSVQRLRRNVEEENVVGFVHESKVVINRLIEGDSRRLNVLSVIGMGGLGKTTLARKVYNSDEVKKHFNCRSSSNKIKKKGKKKHKEAVNNSQDTSSLSDDELKKRLWEYLECKKYLLVLDDLWKIQDWDELKDAFPDGNRGSRILITSRLKDVASHTSRDPPYLLQFLNEEQSWELFSKKVFRGGEEYSCDLESVGKQIVKSCRGLPLSIVVLAGLLANKEKSHREWSKVLGHVNWYLTRDETQVKDVVLKLSFDDLPSRLKPCFLYLGIFPEDSEIRVRQLLQLWVAEGFIQETGSRDAYDVAEDYLYELIDRSLVQVARVKINGGVKTCQIHDLLRDLCILKSQEDKIFEICTDTNILIPTKPRRLFVHSTMSHFVSSSTKDHSCVRSLFCSDPNLFVARGFKLAQVASEEWKLLTKGFKLVRVLNLEGRDFSKIPSNLGNFIHLRSLRIDSNYIQSVPDSICNLQNLQTLDIGPSTMTFRIYKHYPISFPYEISKLKHLRHVYTYRPIKLRFNSSKSNGEVMWHLQTIGFIALDKKTTYLVEKASFPKLKTLRLCISSDFKGDAPKMLLSLQQLKHLNKLAIYMEWEANYKLLKVLQSLKHITHLKILKIIINDLKFVTSAPMFPPNITKLTLSHFRCLNDAGMKAIGSLTKLQVLILIGKEWCANTYLVLNCVEDGFPQLKEFQMKTLQVRNWKLANGSMPRLQTLVIDTCYHLDSLPSELWSLTTLRKVHVCKPSNAIARLLQDLEVNNRCELIVE 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02587 909 Gene3D - 148 309 IPR027417 -
Trre7g02587 909 Coils Coil 141 161 - -
Trre7g02587 909 Gene3D - 315 401 IPR042197 -
Trre7g02587 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 416 IPR027417 -
Trre7g02587 909 FunFam Probable disease resistance protein At1g61300 145 310 - -
Trre7g02587 909 Gene3D Ribonuclease Inhibitor 507 906 IPR032675 -
Trre7g02587 909 Pfam Rx N-terminal domain 5 85 IPR041118 -
Trre7g02587 909 SUPERFAMILY L domain-like 481 884 - -
Trre7g02587 909 PRINTS Disease resistance protein signature 613 629 - -
Trre7g02587 909 PRINTS Disease resistance protein signature 351 365 - -
Trre7g02587 909 PRINTS Disease resistance protein signature 187 202 - -
Trre7g02587 909 PRINTS Disease resistance protein signature 257 271 - -
Trre7g02587 909 FunFam Probable disease resistance protein At1g63360 402 491 - -
Trre7g02587 909 FunFam Probable disease resistance protein At5g66910 315 402 - -
Trre7g02587 909 MobiDBLite consensus disorder prediction 219 244 - -
Trre7g02587 909 Pfam NB-ARC domain 172 400 IPR002182 GO:0043531
Trre7g02587 909 Gene3D - 1 130 - -
Trre7g02587 909 Coils Coil 106 133 - -
Trre7g02587 909 PANTHER DISEASE RESISTANCE PROTEIN RP 53 837 IPR044974 GO:0006952
Trre7g02587 909 Gene3D - 402 492 IPR036388 -
Trre7g02587 909 CDD RX-CC_like 2 125 IPR038005 -
Trre7g02587 909 MobiDBLite consensus disorder prediction 219 233 - -
Trre7g02587 909 MobiDBLite consensus disorder prediction 127 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02587 Trre-Chr7 21298942 21301761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02587 174 488 WRKY Transcription Factor Family AT5G45050 25.231 2.07e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02587 - - mtr:25492796 1298.49