Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02581 ATGGCGGCTACTGTATCTGCTTGGTCCAAACCAGGTGCATGGGCACTTGATTCTGAAGAACACGAAGCTGAACTCCTTCAAAACAACAACAACAACAACAACGTTGTTGTTGAATCCAAACCACTCGCTGAATTCCCTTCTCTCGCTGTCGCCGCCGCAACAAAACCCAAAAAGAAGAAAGCTCAAACCCTATCTTTGGCCGAATTCACTGCCAAACCTGTTTCTTCTTTTACTCATCAAGATCCGGTTGATCTTCCCACCGGTCCACGTCAGCGAACCGCTGAGGAACTCGAACGTGACCGGTCTCGTATTGGTGGAGGATTTGGATCTTACGGTGGTGGCCGTCCTAATCGCAATTCCGAAAGTGATGAATCTTCTGTTTCAAGATGGGGTTCTTCTAGGGTTTCCAGAAACGATTCGTTTGGTTCTAGGGATAGGGATTCTAATCGTGATTCTCAACCTTCTAGGGCTGATGAAATTGATAATTGGGCTGCTGCTAAGAAACCTTCCTTTGGGAATGGCTCTGATAGAAGGGATAGAGTTGAAAGAGGTGGTGGTTTTTTCGATTCGCAGTCGCGGGCTGATGAATCTGATAGCTGGGTTACTAATAAGAATTTTGTGCCGACCGAGGGACGGAGATTTGGTGGTGGTGGTGATAGAGAGAGGAGAGTAGGTTTTGGTACTAGTGGTGGTGCTGATTCGGATAATTGGAATAAGAAGAAAGTTGGTGAATTTAGTGTTGCAAGTGAAAGAACTGAGAATGTTGTTGTTGGTGGAAGGCCAAGGCTTGTTTTGCAACCGCGTTCTGCGCCACCGAGTAATGAAAATCAGGATGTTCCTACTGCTGCTGCTGTTGTTGTAGCAAAGCCTAAGGGTGCAAATCCCTTTGGTGAGGCTAGGCCAAGAGAGCAGGTTTTGGCTGAGAAAGGTCAGGATTGGAAGAAGATTGATGAGCAACTTGAGACCATGAAGATTAAGGAGACAACAGTGGTTGAAGGATTTGGAAAGAGGGGTTTTGGTTCTGGTAATGGACGCGGTGAAGATCGATCTGAGAGGAGTTGGAGGAAATCAACTCCATCTGATGATGGTCGTTCAGAAAGTGCTGAGAAAGTGGAGGATGAACACATTGAAGAAAACTAA 1140 0.4623 MAATVSAWSKPGAWALDSEEHEAELLQNNNNNNNVVVESKPLAEFPSLAVAAATKPKKKKAQTLSLAEFTAKPVSSFTHQDPVDLPTGPRQRTAEELERDRSRIGGGFGSYGGGRPNRNSESDESSVSRWGSSRVSRNDSFGSRDRDSNRDSQPSRADEIDNWAAAKKPSFGNGSDRRDRVERGGGFFDSQSRADESDSWVTNKNFVPTEGRRFGGGGDRERRVGFGTSGGADSDNWNKKKVGEFSVASERTENVVVGGRPRLVLQPRSAPPSNENQDVPTAAAVVVAKPKGANPFGEARPREQVLAEKGQDWKKIDEQLETMKIKETTVVEGFGKRGFGSGNGRGEDRSERSWRKSTPSDDGRSESAEKVEDEHIEEN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02581 379 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 366 IPR010433 GO:0003743
Trre7g02581 379 MobiDBLite consensus disorder prediction 192 206 - -
Trre7g02581 379 MobiDBLite consensus disorder prediction 259 282 - -
Trre7g02581 379 MobiDBLite consensus disorder prediction 172 186 - -
Trre7g02581 379 MobiDBLite consensus disorder prediction 69 238 - -
Trre7g02581 379 MobiDBLite consensus disorder prediction 115 138 - -
Trre7g02581 379 MobiDBLite consensus disorder prediction 331 379 - -
Trre7g02581 379 MobiDBLite consensus disorder prediction 139 163 - -
Trre7g02581 379 MobiDBLite consensus disorder prediction 342 379 - -
Trre7g02581 379 Pfam Plant specific eukaryotic initiation factor 4B 7 327 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02581 Trre-Chr7 21268748 21270664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02581 1 357 Eukaryotic Initiation Factors Gene Family AT4G38710 51.908 9.19e-72 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02581 - - pvu:PHAVU_011G033300g 420.624