Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02571 ATGGAGAAATTCTCATTCTCCTTTATCATTTTCACAACATTTCTACTTTGTTTCTTCTTCTCTTCTCAACAAGCTAGATCACAAAGTGATGATGATGATGATGATTCACAACCACTTCTTGCACTCAAAAAATCCATAGACATTCATAACAAACTTCCATGGCCAGAAAAAAACGACGACGTTTGCAGTTGGGAAGGAGTTAAGGATTGTTTCAAAGGAAGAGTTAGAAAGCTAGTACTAGAATATTTCAACTTAACTGGAACATTAGATTCAAAAATCTTGAACCGTTTGGATCAACTTCGAGTTCTTAGTTTCAAAGGAAACTCACTTTCTGGTCAAATCCCTAATCTCTCAAATCTCGTCAATTTGAAATCTATTTATCTTAATGATAATAACTTCTCCGGTGAGTTTCCGGCTTCTGTTTCAGTTCTTCACCGTGTTAAAGTTATTGTTCTGTCTGGTAATAGAATCTCCGGCGAGATTCCGGCGTCGTTGCTTAAGCTTTCTCGGCTCTATGTTCTCTACTTGGAAGATAATTTGTTTACTGGTTCGATTCCTGGTTTTAATCAAACCGGACTTAAGTATTTGAATGTCTCGAATAATAAACTCTCCGGCGAGATTCCGGTGACAAATGCATTGAACCGGTTCAATGCGTCGTCGTTTTCGGGGAACTTAGAGCTGTGCGGAGAAAAGATCCACAAAAAATGCAGAAGTAGCAATCTGTTTCCGTCGCAGTTGGCGCCGTCACCGTCGGTTGGTTCCGTTGGAGGGAACACGAAAACGACGTCGTCGAAGTCGAAATCGAACCGTACGAAACTGATAAAGATAATTGGAGGGAGTGTTAGCGGGTTTGTTTTGTTGCTAATTTGCTTAATGATACTTGTGTGGGTAATTCGCAAGAACCGTAGGAAAAGGGTGGGATCCTCTGCAGCGAGGAGAGGGAAAAGTGCTGACGTGGCAGCAGGAGAAGGAGAAAATGATGGAGGAGGAGGAGAGGGTAGAGGAAGTAATTATGAAGCAAAACAAGGAGGATTTGCTTGGGAAAATGAGGGTATAGGGAAATTGGTGTTCTGCGGAGCAGGGGATCGAGAAATGGGTTATAGTTTAGAGGATTTACTTAAGGCTTCTGCTGAGACATTAGGGAGGGGTATTATGGGAAGTACATATAAAGCAGTGATGGAATCAGGTTTTATTGTTACGGTTAAGAGATTGAAAGATGCTAGGTACCCTGGTTTAGAGGAGTTTAGGACACATATAGACTTACTTGGAAAGCTTAGACATCCTAATTTGGTCCCACTTAGGGCTTATTTTCAAGCTAAAGAAGAACGTCTTCTAGTCTATGATTATTTTCCTAATGGAAGCCTCTTCTCTCTTGTTCATGGATCAAAAACATCTAGCGGTGGAAAACCTCTTCACTGGACATCATGTCTTAAAATTGCAGAAGATCTAGCAACGGGCCTTCTCTATATCCACCAAAACCCCGGCATGACTCATGGAAACCTGAAATCTTCTAATGTGTTACTTGGTTCCGACTTCGAGTCCTGTCTCACCGATTACGGTCTCACCGTGTTCCTCAATCCCGACACAATGGAAGAACCAAGTGCCACTTCTTTTTTCTATAGAGCGCCTGAGTGCCGTAGTTTTCAGCGACCACAAACTCAACCTGCCGATGTATACAGCTTTGGTGTCCTTCTCCTAGAGCTTTTGACGGGAAAAACACCCTACCAAGACCTTGTTCAGACACACGGTTCAGATATACCTAAATGGGTTCGGTCAGTGCGTGAAGAAGAAACCGAATCTGGTGACGATCCTGCCTCGTCAGGCAATGAAGCGTCTGAAGAGAAGCTTCAGGCTCTATTGAACATTGCAATGGCATGTGTTTCAGTTGTGCCGGAGAATAGGCCTACAATGAGAGAAGTTCTAAAGATGATAAGAGATTCAAGAGGGGAAGCTCATGTCTCGTCTAATAATAGTAGTGATCATTCACCTGGTAGATGGTCAGATACAGTTCAAAGTTTGCCAAGGGATGAACATCTTAGCATATAA 2046 0.4233 MEKFSFSFIIFTTFLLCFFFSSQQARSQSDDDDDDSQPLLALKKSIDIHNKLPWPEKNDDVCSWEGVKDCFKGRVRKLVLEYFNLTGTLDSKILNRLDQLRVLSFKGNSLSGQIPNLSNLVNLKSIYLNDNNFSGEFPASVSVLHRVKVIVLSGNRISGEIPASLLKLSRLYVLYLEDNLFTGSIPGFNQTGLKYLNVSNNKLSGEIPVTNALNRFNASSFSGNLELCGEKIHKKCRSSNLFPSQLAPSPSVGSVGGNTKTTSSKSKSNRTKLIKIIGGSVSGFVLLLICLMILVWVIRKNRRKRVGSSAARRGKSADVAAGEGENDGGGGEGRGSNYEAKQGGFAWENEGIGKLVFCGAGDREMGYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLEEFRTHIDLLGKLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLVHGSKTSSGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDTMEEPSATSFFYRAPECRSFQRPQTQPADVYSFGVLLLELLTGKTPYQDLVQTHGSDIPKWVRSVREEETESGDDPASSGNEASEEKLQALLNIAMACVSVVPENRPTMREVLKMIRDSRGEAHVSSNNSSDHSPGRWSDTVQSLPRDEHLSI 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02571 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 649 IPR046959 -
Trre7g02571 681 Gene3D Ribonuclease Inhibitor 34 189 IPR032675 -
Trre7g02571 681 MobiDBLite consensus disorder prediction 307 335 - -
Trre7g02571 681 SUPERFAMILY Protein kinase-like (PK-like) 378 652 IPR011009 -
Trre7g02571 681 Pfam Protein kinase domain 377 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02571 681 FunFam Nuclear pore complex protein NUP107 32 187 - -
Trre7g02571 681 MobiDBLite consensus disorder prediction 650 681 - -
Trre7g02571 681 ProSiteProfiles Protein kinase domain profile. 374 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g02571 681 SUPERFAMILY L domain-like 47 228 - -
Trre7g02571 681 Gene3D Ribonuclease Inhibitor 190 240 IPR032675 -
Trre7g02571 681 Gene3D Phosphorylase Kinase; domain 1 360 449 - -
Trre7g02571 681 Gene3D Transferase(Phosphotransferase) domain 1 450 668 - -
Trre7g02571 681 MobiDBLite consensus disorder prediction 589 612 - -
Trre7g02571 681 MobiDBLite consensus disorder prediction 247 266 - -
Trre7g02571 681 MobiDBLite consensus disorder prediction 648 681 - -
Trre7g02571 681 Pfam Leucine rich repeat N-terminal domain 33 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02571 Trre-Chr7 21151637 21154899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02571 14 681 Receptor kinase-like Gene Family AT1G60630 60.741 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre7g02571 Pkinase 1.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02571 - - lja:Lj3g3v3500180.1 1014.22