Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02522 ATGTACTGGAGGAGAATACAGTGCAGAGATCGGAGATGGGCTTTGTTGTTGCAGCCATCAAAATACTTCTATAGGCCAAAATCATCTGATCATCATTGCTTTCAGTCTTTATCACCAAAGACCACCGTGAAAGAATATTCTTCACACGGTGGTATTATTAGGAGAGATGTTTTAGGTTCAGATTCATCTAGTCATGTTTCATCTAGACATAGTTTTACTGGTCTGAACAGAAGGCCTAGTTTTTGTCTTAGGAGTACTCAGATACACGCTTTTAGTTCTAAAAGCGATGGAAGTAATGCAAGTGAGAATAAACAAGTACATGTTAATGACGGAGCTAATTTTGATAAGGGAAAGAATCAGATAGATAAGTCTGGGGAAGATGTTAAATGCAGCAATGCACATGCACGGCTTGGAGTACAGGATCAAGAGGAATGGCTTAATAATGAAAAGCTTGCTGTAGAAAGTAAAAGGAAAGAATCACCATTTTTGACAAGAAAAGACAAGTTTAAAAATGAGTTTTTGAGAAGAATTGTTCCGTGGGAGAAAATAAACATTTCATGGGACACGTTTCCTTATCACATACATGAGCATACGAAAAATCTTCTGACGGAATGTGCTGCTTCCCATTTGAGACATAATAAGTTAACTTGTTTTGGCTCTCGCCGTGCATCTTCAAGTGGAAGAATATTGCTTCAGAGCATTCCTGGCACTGAGCTCTATCGCGAGAGAGTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCGTTGTTGGTGCTTGACAGCAGCATCCTTGCTCCTTATGATCTTGACGATGATCAATCAGACTATGAGTCTGATGATCCAGAATCTGGGGAAGAGGGTGCTCTAGATTCAGAGAATGAAGATGATAATGATGCTAGTAATGAAGAAGAGTGGTCTAGCGGTGCTGAAGCAAAGTCAGATGCAAGTGATACTGATGATGCAATAGCATCCGCTGAAGCAGCCCTTAAGAAAGTGAAAGCAGCTGTTCAGAAACTTGTCCCTTACAATGTTGAATTTGAGAAGATGGTGACTGGTGGAGATGACAGTTCCGAGTCATCGAGTTCTAATGATGCCAAGTCTTCTGATAAATCTGAAAGTCGGCTAAGAAAAGGTGACCGCGTGAAGTACATTGGGTCTTCTATTGAATTTACAGACGATGATAGGGATGTAACTTTAAATAATGGTCAGAAAGGAGAGGTATATGAGGTTAATGGAGATCGAGTTGCTGTTATCTTGGATAGTAATGAAGAGAGGGCTAATGAGAGTGAGGTTGAAAACCGTAACGACGATTGTAAAAAACGATCAGTTTATTGGATAGATGTTAAGGACATTGAGAATGATCTTGATGCTCAATCACAGGATTGCTACATAGCAATGGAGGCTTTATGTGAGGTTTTGAATTCCAAACAACCTCTTATAGTCTATTTTCCGGATAGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCAAGCCGAAATGAGTTCTTTAACAAGGTTGAGGAGATTTTTGACCGGTTATCTGGTCCGGTAGTATTGATTTGCGGGCAAAACAAAGTTCAATCAGGATCAAAGGAGAAAGAAAAATTTACGATGATACTTCCAAACTTCGGACGTGTTGCTAAGCTGCCTCTTTCTTTGAAGCACCTGACCGATGGATTCAAAGGGGGAAAGACATCAGAAGAGGATGAAATTAACAAGCTCTTCTCGAATGTTTTTAGTGTACATCCACCTAAGGAGGAGAATCTGCAGACAGTATTCAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAATTTGAATGAACTACGGAAGGTTCTTGAAGAAAATTATATATCGTGCATCGACCTTTTGCATGTGAATACTGATGGCATCATTTTAACAAAACAAAAAGCTGAAAAAGTGGTAGGCTGGGCAAAAAATCATCACTTATCATCATGCTTGCATCCTTCTATTAAAGGAGAAAAATTGTTCATACCTCGCGAAAGTCTTGAAATTGCAATCTCAAGGATGAAAGACATGGAAACTATGTCAAGAAAACCTTCTCAGAACCTCAAGAACCTTGCGAAGGATGAGTTCGAGAGCAACTTCATTTCATCTGTTGTAGCTCCTGGTGAAATTGGTGTACAGTTTGATGACATAGGTGCTCTTGAAGATGTTAAGAAGGCACTTCAAGAACTTGTTATTCTTCCAATGAGAAGGCCTGAGCTTTTCTCTCATGGAAACCTGTTGCGGCCCTGCAAAGGAATATTACTCTTTGGTCCTCCTGGAACCGGGAAAACCCTTCTGGCCAAGGCACTTGCGACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCGACCCTTACGTCGAAGTGGTTTGGAGATGCTGAGAAACTAACCAAAGCGCTTTTCTCATTTGCCAGCAAGCTTGCACCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGAGGTGGTGCTTTTGAGCATGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCGGCGTGGGATGGATTGAGGTCAAAAGAAAATCAGAGAATCCTCATTCTTGGAGCAACTAACCGGCCATTTGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAAAGAAGATTCTAAGAATATTTCTTGCAAAAGAAAATCTGAATTCTGATTTTCAGTATGACAAACTTGCTAACTTGACGGAAGGTTACTCTGGCAGTGATTTGAAGAACCTCTGTGTTGCTGCAGCATATAGACCGGTTCAAGAGCTCTTAGAAGAAGAAAAGAAGAGAGACGATGGTGCTACAACTTCAGTATTAAGGCCTCTTAATTTGGATGATTTTGTACAAGCAAAATCCAAGGTGGGTCCGTCTGTTGCGTACGATGCAACAAGCATGAATGAGCTAAGGAAGTGGAATGAAATGTATGGTGAAGGCGGTAGTAGAACAAAATCACCATTTGGATTCGGGAACCGATCTTGA 3048 0.4039 MYWRRIQCRDRRWALLLQPSKYFYRPKSSDHHCFQSLSPKTTVKEYSSHGGIIRRDVLGSDSSSHVSSRHSFTGLNRRPSFCLRSTQIHAFSSKSDGSNASENKQVHVNDGANFDKGKNQIDKSGEDVKCSNAHARLGVQDQEEWLNNEKLAVESKRKESPFLTRKDKFKNEFLRRIVPWEKINISWDTFPYHIHEHTKNLLTECAASHLRHNKLTCFGSRRASSSGRILLQSIPGTELYRERVVRALAQDLQVPLLVLDSSILAPYDLDDDQSDYESDDPESGEEGALDSENEDDNDASNEEEWSSGAEAKSDASDTDDAIASAEAALKKVKAAVQKLVPYNVEFEKMVTGGDDSSESSSSNDAKSSDKSESRLRKGDRVKYIGSSIEFTDDDRDVTLNNGQKGEVYEVNGDRVAVILDSNEERANESEVENRNDDCKKRSVYWIDVKDIENDLDAQSQDCYIAMEALCEVLNSKQPLIVYFPDSSQWLHKSVPKSSRNEFFNKVEEIFDRLSGPVVLICGQNKVQSGSKEKEKFTMILPNFGRVAKLPLSLKHLTDGFKGGKTSEEDEINKLFSNVFSVHPPKEENLQTVFKKQLEEDRKIVISRSNLNELRKVLEENYISCIDLLHVNTDGIILTKQKAEKVVGWAKNHHLSSCLHPSIKGEKLFIPRESLEIAISRMKDMETMSRKPSQNLKNLAKDEFESNFISSVVAPGEIGVQFDDIGALEDVKKALQELVILPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRKKILRIFLAKENLNSDFQYDKLANLTEGYSGSDLKNLCVAAAYRPVQELLEEEKKRDDGATTSVLRPLNLDDFVQAKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKSPFGFGNRS 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02522 1015 Gene3D - 719 995 IPR027417 -
Trre7g02522 1015 MobiDBLite consensus disorder prediction 269 319 - -
Trre7g02522 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 982 IPR027417 -
Trre7g02522 1015 MobiDBLite consensus disorder prediction 351 377 - -
Trre7g02522 1015 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 168 1006 - -
Trre7g02522 1015 ProSitePatterns AAA-protein family signature. 863 882 IPR003960 GO:0005524|GO:0016887
Trre7g02522 1015 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 718 894 - -
Trre7g02522 1015 MobiDBLite consensus disorder prediction 305 319 - -
Trre7g02522 1015 SMART AAA_5 756 893 IPR003593 GO:0016887
Trre7g02522 1015 Pfam AAA+ lid domain 913 949 IPR041569 -
Trre7g02522 1015 Gene3D - 892 977 - -
Trre7g02522 1015 MobiDBLite consensus disorder prediction 270 303 - -
Trre7g02522 1015 Pfam ATPase family associated with various cellular activities (AAA) 760 890 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02522 Trre-Chr7 20724177 20740421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02522 719 951 Calmodulin-binding Proteins AT3G56690 38.983 6.11e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02522 - - gmx:100812718 1582.39