Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02521 ATGTACTGGAGGAGAATACAGTGCAGAGATCGGAGATGGGCTTTGTTGTTGCAGCCATCAAAATACTTCTATAGGCCAAAATCATCTGATCATCATTGCTTTCAGTCTTTATCACCAAAGACCACCGTGAAAGAATATTCTTCACACGGTGGTATTATTAGGAGAGATGTTTTAGGTTCAGATTCATCTAGTCATGTTTCATCTAGACATAGTTTTACTGGTCTGAACAGAAGGCCTAGTTTTTGTCTTAGGAGTACTCAGATACACGCTTTTAGTTCTAAAAGCGATGGAAGTAATGCAAGTGAGAATAAACAAGTACATGTTAATGACGGAGCTAATTTTGATAAGGGAAAGAATCAGATAGATAAGTCTGGGGAAGATGTTAAATGCAGCAATGCACATGCACGGCTTGGAGTACAGGATCAAGAGGAATGGCTTAATAATGAAAAGCTTGCTGTAGAAAGTAAAAGGAAAGAATCACCATTTTTGACAAGAAAAGACAAGTTTAAAAATGAGTTTTTGAGAAGAATTGTTCCGTGGGAGAAAATAAACATTTCATGGGACACGTTTCCTTATCACATACATGAGCATACGAAAAATCTTCTGACGGAATGTGCTGCTTCCCATTTGAGACATAATAAGTTAACTTGTTTTGGCTCTCGCCGTGCATCTTCAAGTGGAAGAATATTGCTTCAGAGCATTCCTGGCACTGAGCTCTATCGCGAGAGAGTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCGTTGTTGGTGCTTGACAGCAGCATCCTTGCTCCTTATGATCTTGACGATGATCAATCAGACTATGAGTCTGATGATCCAGAATCTGGGGAAGAGGGTGCTCTAGATTCAGAGAATGAAGATGATAATGATGCTAGTAATGAAGAAGAGTGGTCTAGCGGTGCTGAAGCAAAGTCAGATGCAAGTGATACTGATGATGCAATAGCATCCGCTGAAGCAGCCCTTAAGAAAGTGAAAGCAGCTGTTCAGAAACTTGTCCCTTACAATGTTGAATTTGAGAAGATGGTGACTGGTGGAGATGACAGTTCCGAGTCATCGAGTTCTAATGATGCCAAGTCTTCTGATAAATCTGAAAGTCGGCTAAGAAAAGGTGACCGCGTGAAGTACATTGGGTCTTCTATTGAATTTACAGACGATGATAGGATTTCACTGGGGAAGGTACCGACGTCTGATGGTCCAACTAATGCTTATATTATTATGGAAAGGGATGTAACTTTAAATAATGGTCAGAAAGGAGAGGTATATGAGGTTAATGGAGATCGAGTTGCTGTTATCTTGGATAGTAATGAAGAGAGGGCTAATGAGAGTGAGGTTGAAAACCGTAACGACGATTGTAAAAAACGATCAGTTTATTGGATAGATGTTAAGGACATTGAGAATGATCTTGATGCTCAATCACAGGATTGCTACATAGCAATGGAGGCTTTATGTGAGGTTTTGAATTCCAAACAACCTCTTATAGTCTATTTTCCGGATAGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCAAGCCGAAATGAGTTCTTTAACAAGGTTGAGGAGATTTTTGACCGGTTATCTGGTCCGGTAGTATTGATTTGCGGGCAAAACAAAGTTCAATCAGGATCAAAGGAGAAAGAAAAATTTACGATGATACTTCCAAACTTCGGACGTGTTGCTAAGCTGCCTCTTTCTTTGAAGCACCTGACCGATGGATTCAAAGGGGGAAAGACATCAGAAGAGGATGAAATTAACAAGCTCTTCTCGAATGTTTTTAGTGTACATCCACCTAAGGAGGAGAATCTGCAGACAGTATTCAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAATTTGAATGAACTACGGAAGGTTCTTGAAGAAAATTATATATCGTGCATCGACCTTTTGCATGTGAATACTGATGGCATCATTTTAACAAAACAAAAAGCTGAAAAAGTGGTAGGCTGGGCAAAAAATCATCACTTATCATCATGCTTGCATCCTTCTATTAAAGGAGAAAAATTGTTCATACCTCGCGAAAGTCTTGAAATTGCAATCTCAAGGATGAAAGACATGGAAACTATGTCAAGAAAACCTTCTCAGAACCTCAAGAACCTTGCGAAGGATGAGTTCGAGAGCAACTTCATTTCATCTGTTGTAGCTCCTGGTGAAATTGGTGTACAGTTTGATGACATAGGTGCTCTTGAAGATGTTAAGAAGGCACTTCAAGAACTTGTTATTCTTCCAATGAGAAGGCCTGAGCTTTTCTCTCATGGAAACCTGTTGCGGCCCTGCAAAGGAATATTACTCTTTGGTCCTCCTGGAACCGGGAAAACCCTTCTGGCCAAGGCACTTGCGACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCGACCCTTACGTCGAAGTGGTTTGGAGATGCTGAGAAACTAACCAAAGCGCTTTTCTCATTTGCCAGCAAGCTTGCACCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGAGGTGGTGCTTTTGAGCATGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCGGCGTGGGATGGATTGAGGTCAAAAGAAAATCAGAGAATCCTCATTCTTGGAGCAACTAACCGGCCATTTGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAAAGAAGATTCTAAGAATATTTCTTGCAAAAGAAAATCTGAATTCTGATTTTCAGTATGACAAACTTGCTAACTTGACGGAAGGTTACTCTGGCAGTGATTTGAAGAACCTCTGTGTTGCTGCAGCATATAGACCGGTTCAAGAGCTCTTAGAAGAAGAAAAGAAGAGAGACGATGGTGCTACAACTTCAGTATTAAGGCCTCTTAATTTGGATGATTTTGTACAAGCAAAATCCAAGGTGGGTCCGTCTGTTGCGTACGATGCAACAAGCATGAATGAGCTAAGGAAGTGGAATGAAATGTATGGTGAAGGCGGTAGTAGAACAAAATCACCATTTGGATTCGGGAACCGATCTTGA 3111 0.4041 MYWRRIQCRDRRWALLLQPSKYFYRPKSSDHHCFQSLSPKTTVKEYSSHGGIIRRDVLGSDSSSHVSSRHSFTGLNRRPSFCLRSTQIHAFSSKSDGSNASENKQVHVNDGANFDKGKNQIDKSGEDVKCSNAHARLGVQDQEEWLNNEKLAVESKRKESPFLTRKDKFKNEFLRRIVPWEKINISWDTFPYHIHEHTKNLLTECAASHLRHNKLTCFGSRRASSSGRILLQSIPGTELYRERVVRALAQDLQVPLLVLDSSILAPYDLDDDQSDYESDDPESGEEGALDSENEDDNDASNEEEWSSGAEAKSDASDTDDAIASAEAALKKVKAAVQKLVPYNVEFEKMVTGGDDSSESSSSNDAKSSDKSESRLRKGDRVKYIGSSIEFTDDDRISLGKVPTSDGPTNAYIIMERDVTLNNGQKGEVYEVNGDRVAVILDSNEERANESEVENRNDDCKKRSVYWIDVKDIENDLDAQSQDCYIAMEALCEVLNSKQPLIVYFPDSSQWLHKSVPKSSRNEFFNKVEEIFDRLSGPVVLICGQNKVQSGSKEKEKFTMILPNFGRVAKLPLSLKHLTDGFKGGKTSEEDEINKLFSNVFSVHPPKEENLQTVFKKQLEEDRKIVISRSNLNELRKVLEENYISCIDLLHVNTDGIILTKQKAEKVVGWAKNHHLSSCLHPSIKGEKLFIPRESLEIAISRMKDMETMSRKPSQNLKNLAKDEFESNFISSVVAPGEIGVQFDDIGALEDVKKALQELVILPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRKKILRIFLAKENLNSDFQYDKLANLTEGYSGSDLKNLCVAAAYRPVQELLEEEKKRDDGATTSVLRPLNLDDFVQAKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKSPFGFGNRS 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02521 1036 SMART AAA_5 777 914 IPR003593 GO:0016887
Trre7g02521 1036 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 739 915 - -
Trre7g02521 1036 MobiDBLite consensus disorder prediction 269 319 - -
Trre7g02521 1036 Gene3D - 913 998 - -
Trre7g02521 1036 Pfam AAA+ lid domain 934 970 IPR041569 -
Trre7g02521 1036 ProSitePatterns AAA-protein family signature. 884 903 IPR003960 GO:0005524|GO:0016887
Trre7g02521 1036 MobiDBLite consensus disorder prediction 305 319 - -
Trre7g02521 1036 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 168 1027 - -
Trre7g02521 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 741 1003 IPR027417 -
Trre7g02521 1036 MobiDBLite consensus disorder prediction 351 378 - -
Trre7g02521 1036 Gene3D - 740 1016 IPR027417 -
Trre7g02521 1036 MobiDBLite consensus disorder prediction 270 303 - -
Trre7g02521 1036 Pfam ATPase family associated with various cellular activities (AAA) 781 911 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02521 Trre-Chr7 20724177 20740421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02521 740 972 Calmodulin-binding Proteins AT3G56690 38.983 6.75e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02521 - - gmx:100802939 1595.87