Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02516 ATGGCTGCATCTCTTATCCGTCTTCATTTTCATGATTGTTTTGTCCAAGGGTGTGATGCATCAATTTTGTTGGATGATAGTTCCACAATCGAGAGCGAAAAGAGTGCACTTCCAAATGTTAACTCAGTAAGGGGATTTGAAATCATTGATAAAGCAAAATCTGAGGTGGAGAAAGTATGTCCAGGAGTTGTGTCTTGTGCAGACATAGTAGCTATAGCAGCACGTGATGCTTCATTTGCTGTTGGTGGTCCATCATGGACAGTGAAACTTGGACGAAGAGATTCTACCACAGCAAGCAAAAGTTTGGCCAATACAGACCTTCCATTATTTACAGACGATCTTACAACTCTTATATCTCGTTTTACAAACAACGGTCTCACTGCGAGAGACATGGTTACTCTATCTGGTGCGCATACACTCGGACAAGCTCAATGTTTCACATTTCGTGACAGGATATACAACAATGCAAGTGACATAGATGCTGGATTTGCTAGCACTCGCCAACGTGGTTGTCCATCTTTGAGTAACACCGCAAACAATCAAAAGTTGGCAGCTTTGGACTTAGTCACACCCAATTCTTTTGACAACAACTATTTCAAGAATTTAATTCAAAAGAAGGGTCTTTTACAATCTGATCAAATTTTATTCAGTGGAGGATCTACAGATTCCATTGTTACAGAATACAGCAAAAATCCTACAACTTTTAAATCTGACTTTGCAGCGGCTATGATAAAGATGGGAGATATTAAACCCTTAACAGGATCTGCCGGAATTATAAGAACCATTTGCAGCGCTGCCAACTAA 804 0.4005 MAASLIRLHFHDCFVQGCDASILLDDSSTIESEKSALPNVNSVRGFEIIDKAKSEVEKVCPGVVSCADIVAIAARDASFAVGGPSWTVKLGRRDSTTASKSLANTDLPLFTDDLTTLISRFTNNGLTARDMVTLSGAHTLGQAQCFTFRDRIYNNASDIDAGFASTRQRGCPSLSNTANNQKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQILFSGGSTDSIVTEYSKNPTTFKSDFAAAMIKMGDIKPLTGSAGIIRTICSAAN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02516 267 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Plant peroxidase signature 241 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Plant peroxidase signature 185 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Plant peroxidase signature 201 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PANTHER PEROXIDASE 72-RELATED 1 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 SUPERFAMILY Heme-dependent peroxidases 1 267 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 Gene3D - 1 264 - -
Trre7g02516 267 Gene3D Peroxidase, domain 2 108 246 - -
Trre7g02516 267 Pfam Peroxidase 1 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Trre7g02516 267 ProSiteProfiles Plant heme peroxidase family profile. 1 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g02516 267 FunFam Peroxidase 108 246 - -
Trre7g02516 267 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Trre7g02516 267 CDD secretory_peroxidase 1 265 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02516 Trre-Chr7 20671333 20672457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02516 1 267 Peroxidase AT1G14550 71.004 1.29e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02516 K00430 - gmx:100786161 473.781