Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02504 ATGCATTTTCACATTCCCTATCTTTCCAACACCATGACTAAACAAACCAATCTCAACCTCACCTCCTCCTCTTCCTCATCCTCCTCGGCTTTCGTGGCCGCAAACTTCAACTTTAACATGATATATTCCCTTGGTCTCTACCTCTTAGAAGATATCCAAATTCTTGAAATTCTTATTGCTATTACCATCTTCATAATCATTCATTCTCTTAGGCAAAAAAACCATCATGGCTTACCTATTTGGCCTTTTCTCGGCATGTTGCCGTCTTTAATCACCGGTCTAAGGACCAACTTGTATGAATGGATCACCGACGTTCTTAACAAACAAAACGGGACCTTTCGATTCAAAGGTCCTAGTTTTAGCAGCCTCAACTGCATAGTCACTTCTGATCCTCGAAACCTCGAACATCTTCTCAAAACCAAATTCATTAACTTTCCTAAAGGAACTTACTTTAGAAACATGGTTAGAGACTTACTTGGAGATGGTATATTCAGTGCAGACGACGAAATATGGCAGAAACAAAGAAAAACAGCGAGTATCGAATTTCATTCAACAAAGTTCAGAAATTTAACAACTGATTCTTTATTTCAGCTTGTTCATTCAAGGCTTTTACCTGTTTTAGATGAATCAGTTGATAAAAAAATTGTCATTGATCTTCAAGACATTCTTTTAAGGTTAACTTTTGATAATGTTTGTATGATAGCTTTTGGTGTTGATCCTGGTTGTTTGAGTCAAAAACTTCCCGAGATACCGTTCGCGAAGGCGTTTGAAGATGCAACAGAAGCGACCGTGCTTCGTTTCGTTATGCCTACATGTGTTTGGAAGTTCATGAGGCTTCTTAACTTAGGCACAGAAAGAAAACTCAAGAAATCAATTAAAGGGGTTGATGAGTTTGCTGAGAATGTCATAAAGACTAGAAAAAAAGAACTGTCTTTGGAAATTGATGAAAAGAAACAAAGGTCTGATTTGTTAACTGTTTTTATGAAGATGAAAGATGAGAATGGAAGTGCTTATTCAGATAAGTTCTTGAGGGATATATGTGTCAATTTTATATTGGCTGGTAGAGACACTTCTTCTGTGGCTTTGAGTTGGTTTTTTTGGTTGCTTGATAAGAATCATGAAGTGGAGAAGAAGATATTAGAAGAGATATGCAGAGTGGTGAGTCAGAGAAATGATATGAAGAATGAAGAGTTTGCAAATTCATTGATTTTTAGACCTGAAGAGATTAAAAAAATGGATTATTTGCATGCTTGTTTATCTGAAACTCTCAGATTATACCCTTCTGTTCCTGTTGATCACAAGGAGGTAGTTGAGGATGATACATTCCCAGATGGAACAGAACTAAAAAAAGGTACAAAAGTGGTGTATGCAATTTATGCAATGGGAAGAATGGAAAGTATATGGGGAAAAGATTGTAGAGAATTTAAGCCAGAAAGATGGTTAAAAGATGGACATTTCATGAGTGAATCTGCATACAAATTTACTGCATTTAATGGTGGACCAAGGTTATGTTTAGGCAAAGATTTTGCATATTATCAAATGAAATATGTTGCTGCTAGTATCATATATAGATACCATGTTAAGGTTGTTGAGAATCATCCTGTTGAGCCAAAGATTGCATTAACTATGTACATGAAGCATGGAATTAAAGTTAATCTCTATAAGAGGGGTGATGTAGAAATTCAAAAATGA 1692 0.3587 MHFHIPYLSNTMTKQTNLNLTSSSSSSSSAFVAANFNFNMIYSLGLYLLEDIQILEILIAITIFIIIHSLRQKNHHGLPIWPFLGMLPSLITGLRTNLYEWITDVLNKQNGTFRFKGPSFSSLNCIVTSDPRNLEHLLKTKFINFPKGTYFRNMVRDLLGDGIFSADDEIWQKQRKTASIEFHSTKFRNLTTDSLFQLVHSRLLPVLDESVDKKIVIDLQDILLRLTFDNVCMIAFGVDPGCLSQKLPEIPFAKAFEDATEATVLRFVMPTCVWKFMRLLNLGTERKLKKSIKGVDEFAENVIKTRKKELSLEIDEKKQRSDLLTVFMKMKDENGSAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDKNHEVEKKILEEICRVVSQRNDMKNEEFANSLIFRPEEIKKMDYLHACLSETLRLYPSVPVDHKEVVEDDTFPDGTELKKGTKVVYAIYAMGRMESIWGKDCREFKPERWLKDGHFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIYRYHVKVVENHPVEPKIALTMYMKHGIKVNLYKRGDVEIQK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02504 563 CDD CYP86A 113 548 - -
Trre7g02504 563 SUPERFAMILY Cytochrome P450 77 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 Gene3D Cytochrome P450 65 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 PRINTS P450 superfamily signature 495 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 PRINTS P450 superfamily signature 504 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 497 506 IPR017972 GO:0005506|GO:0016705
Trre7g02504 563 PANTHER CYTOCHROME P450 67 550 - -
Trre7g02504 563 Pfam Cytochrome P450 78 541 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 PRINTS E-class P450 group I signature 416 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 PRINTS E-class P450 group I signature 494 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 PRINTS E-class P450 group I signature 504 527 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02504 563 FunFam Cytochrome P450 69 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02504 Trre-Chr7 20576985 20579271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02504 18 563 Cytochrome P450 AT5G23190 71.168 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02504 K15402 - gmx:100809503 888.641