Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02502 ATGCAACTTTTCACATCATTACTACCTTTCTTTCCTCACCTCCTTCCTTCACTACTCCTAATATGTTCTTCAATACTTGCTTGTTTTTTAACACTTCAATGGTTACACCCCAATGCCAAACGTTTACCTCCTGGTTCCATGGGTTGGCCCCTACTAGGAGAGACCCTCAAACTCTACACTCAAAACCCAAACACTTTCTTTTCCACAAGACACAAAAGGTATGGAAATATATTCAAGACTAGGATACTTGGTTATCCATGTGTGATGATTTCCAGTCCAGAGGCAACAAAAACAGTGCTTGTGACACATGCACATTTGTTCAAGCCAACATACCCTGCAAGTAAAGAGAAGATGATAGGACCAGAAGCTGTTTTCTTTCAGCACCTAGGTGAATATCATTCCATGCTCAAGAAACTTGTTCAGTCCACTTTTATGCCATCTGCTATAAAAAATTCAGTCTTTGATGAGGTTCAACAAATTGTCCTTAAACTACTCCCAACTTGGTCCAATACAACCATCGTCGCCTTACAAGAAATGAAAAGGTATGCTTTTGAGGTAGCTGCCATTTCAGCTTTTGGTGAAATAATGGAGATTGAGTTTAAACAAATCAAAGATCTATATGGGAACTTGGAGAAGGGCTATAACTCATATCCTCTATATGTTCCAGGAACTTCTTATTGGAAATCAATCAAGGCAAGGAAGCTTTTGAATGAAACTATAAGGAGATTAATACATAAAAGAAGGGAAAACAATGATTATGGAAGAGGATTGTTGGGAGCTTTGTTAAGAGCTAGAGGTGACAGAATATATAAGCTCACTGATTCTCAGATTATTGATAATCTCATTGGAGTTATATTTGCAGCACATGATACCACTGCTAGTGTTCTAACATGGATTCTAAAGTATTTGCATGACAATGTCAATCTCTTGGAAGCTGTCACGGAAGAGCATGAAGGGATTAAAAAGAAATTAATTATGGAAAATCGTCGGCTTTCATGGGATGACACAAGGCAGATGCCACTCTCTGGCAGGGTTATCCAAGAAACTCTAAGGTGTGCAAGCATACTGTCATTCACATTCAGAGAAGCTGTACAAGACGTTGAGCTCGAAGGTTACACCATTCCCAAAGGTTGGAAGGTCCTTCCCCTCTTTAGAACCATTCATCACTCTGCAGATTTCTTCCCTAAACCAGAAACGTTTGATCCTTCAAGATTCGAGGTAGCACCGAGACCAAACACGTTTATGCCGTTTGGAAACGGAGTCCACTCTTGTCCAGGAAGTGAGCTGGCTAAGCTTGAGATACTCATCCTCCTCCACCACTTAACCCTTTCCTACAGGTGGCAAGTTGTGGGAAATGGAGATGGAATACAGTATTGCCCTTTTCCTGTGCCCAAACATGGACTGTTAATCAATATAATCCCAAAGGAACAAAATACCTAG 1440 0.4035 MQLFTSLLPFFPHLLPSLLLICSSILACFLTLQWLHPNAKRLPPGSMGWPLLGETLKLYTQNPNTFFSTRHKRYGNIFKTRILGYPCVMISSPEATKTVLVTHAHLFKPTYPASKEKMIGPEAVFFQHLGEYHSMLKKLVQSTFMPSAIKNSVFDEVQQIVLKLLPTWSNTTIVALQEMKRYAFEVAAISAFGEIMEIEFKQIKDLYGNLEKGYNSYPLYVPGTSYWKSIKARKLLNETIRRLIHKRRENNDYGRGLLGALLRARGDRIYKLTDSQIIDNLIGVIFAAHDTTASVLTWILKYLHDNVNLLEAVTEEHEGIKKKLIMENRRLSWDDTRQMPLSGRVIQETLRCASILSFTFREAVQDVELEGYTIPKGWKVLPLFRTIHHSADFFPKPETFDPSRFEVAPRPNTFMPFGNGVHSCPGSELAKLEILILLHHLTLSYRWQVVGNGDGIQYCPFPVPKHGLLINIIPKEQNT 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02502 479 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 FunFam Abscisic acid 8 33 474 - -
Trre7g02502 479 Pfam Cytochrome P450 43 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Trre7g02502 479 Gene3D Cytochrome P450 35 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g02502 479 PANTHER CYTOCHROME P450 26 40 464 - -
Trre7g02502 479 SUPERFAMILY Cytochrome P450 38 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02502 Trre-Chr7 20557208 20560011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02502 19 468 Cytochrome P450 AT3G19270 56.455 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02502 K09843 - gmx:100782541 681.404