Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02498 ATGGGTTTGAGTTCAATTATTATAAATTTGAATATTGTTATTCTTATTCTTGTTCTATGTTGGAACAAACAAGTTTTTGGTGTGACAGAGCAAGAAGAGGATAGAGTGTATGAATTACCTGGACAACCTTTGGTGAATTTCAAACAATATTCTGGTTATATTACTGTCAATGAAAGTCATGGAAGAGCACTGTTTTATTGGTTCTTTGAATCTTATGATCAACCTCAACAAAAACCTCTTCTTCTTTGGCTCAATGGAGGCCCTGGATGTTCTTCAATTGGTTATGGAGAAGCAGAGGAACTTGGACCCTTCTTTCCCCAAAATAGCACCCAACCTAAGCTCAAGTTGAACCCTTATTCTTGGAATAAAGCTGCAAATCTTTTGTTTCTTGAATCCCCTGTTGGAGTGGGATTTTCCTACACCAATACCACCAGTGATATACATGAACTTGGTGACACCATTACTGCTAAGGATTCACACACATTTCTCATCAATTGGTTTAAAAGATTTCCTCAATTCAAATCACATGATTTCTACATTGCTGGTGAAAGCTATGCAGGACACTATGTTCCACAACTTTCTGAGCTTATTTTGGATAATAATCACAATTCTTCTAATGAAGATTACATTAACTTCAAAGGGATCATGATTGGTAATGCACTATTGGATGATGAAACTGATCAAAAGGGTATGATAGAATATGCATGGGACCATGCTGTTATATCTGATGGTTTATACCATAACATTACAACCGTATGCAACTTCAGCTATCCAATTCAAAATCAAACAGATGATTGCAATACAGAACTTAACAAATACTTTGATGTGTATAAGCTTATAGACATGTATAGTTTGTACACTCCCATGTGTTTCAGCAACATCAGCAACACAAGAAGAGAATCCCCCGTCATCAAAACTGCGAACCCTCGTTCCCTTTCCAAATTTGACGGTTGGCGTAGAAATCTAGCAGGATACGATCCATGTGCATCAGATTATACTGCAGCATACCTAAATAGGCCAGAAGTTCAAAAGGCACTGCATGCTAATGTCACCAATATTCCATATCCATGGAGTCACTGCAGTAATAATATATCATTTTGGAATGACTCACCGGTGTCCATGCTTCCCGTCCTCAAGAAACTTATTGCCGGCGGTCTCCGCATATGGGTTTACAGTGGAGATACAGATGGAAGAATTCCTGTAACTGCAACAAGATACACACTAAATAAATTGGGACTCCCTATAGTTCAAGATTGGACTCCTTGGTATACGAGTCGTCAGGTGGGAGGATGGAACATTGTATATGATGGTCTAACATTTGTGACAATAAGAGGAGCTGGTCACCAAGTTCCTACTTTTACTCCCAAACAAGCATTTCAGCTACTTCGACACTTCTTAGTCAATAAGAAATTACCACAACATCCTATTTAA 1431 0.3816 MGLSSIIINLNIVILILVLCWNKQVFGVTEQEEDRVYELPGQPLVNFKQYSGYITVNESHGRALFYWFFESYDQPQQKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSTQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTTSDIHELGDTITAKDSHTFLINWFKRFPQFKSHDFYIAGESYAGHYVPQLSELILDNNHNSSNEDYINFKGIMIGNALLDDETDQKGMIEYAWDHAVISDGLYHNITTVCNFSYPIQNQTDDCNTELNKYFDVYKLIDMYSLYTPMCFSNISNTRRESPVIKTANPRSLSKFDGWRRNLAGYDPCASDYTAAYLNRPEVQKALHANVTNIPYPWSHCSNNISFWNDSPVSMLPVLKKLIAGGLRIWVYSGDTDGRIPVTATRYTLNKLGLPIVQDWTPWYTSRQVGGWNIVYDGLTFVTIRGAGHQVPTFTPKQAFQLLRHFLVNKKLPQHPI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02498 476 Gene3D - 374 467 - -
Trre7g02498 476 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Trre7g02498 476 FunFam Carboxypeptidase 324 471 - -
Trre7g02498 476 FunFam Carboxypeptidase 30 292 - -
Trre7g02498 476 FunFam Carboxypeptidase 374 468 - -
Trre7g02498 476 ProSitePatterns Serine carboxypeptidases, histidine active site. 438 455 IPR033124 GO:0004185
Trre7g02498 476 Gene3D - 328 364 - -
Trre7g02498 476 Gene3D alpha/beta hydrolase 30 292 IPR029058 -
Trre7g02498 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 455 IPR001563 GO:0004185|GO:0006508
Trre7g02498 476 Pfam Serine carboxypeptidase 41 467 IPR001563 GO:0004185|GO:0006508
Trre7g02498 476 SUPERFAMILY alpha/beta-Hydrolases 32 473 IPR029058 -
Trre7g02498 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Trre7g02498 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Trre7g02498 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Trre7g02498 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02498 Trre-Chr7 20535727 20542245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02498 336 471 Calmodulin-binding Proteins AT2G22960 29.927 3.12e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02498 K16297 - gmx:100781503 804.668