Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02469 ATGAATTCAGTTAACTCAAGGATAGCTGATGAAAAACTTTCCATGTCTATTCAGAGTAACGAAAAAATTGTTTTGGGGCCTAAAAATCCTTTGAAAGGGAAGTTTCAGGCTTCTATTGGAGCAGATGAGTTTTTCAGCCTTGAGACATGGAAAGCAGCTATGACAGAATTAGTGGCAACTGCCTCTCTAATGGTCACCTTGTCTACTTCCATTATTGCATGTTTGGACTCACATGAAGTTGATCCTAAGCTTATAATTCCCTTTGCAGTTTTCATCAATGCTTTCTTGTTCTTAATTGCCACAGTTCCTCTATCTGGTGGCCACATGAGCCCTGTTTTCACATGCATAGCTGCATTAAAAGGTGTTGTAACACTTTATCGTGCCCTCCTTTATGTGATAGCACAATGCATTGGCTCAATAATTGGTTTCTATATACTAAAGTGTGTCATGGATCCAAGATTAGTAAATACATATTCCTTAGGAGGTTGTGCTATTGGTGGTAAAGGAATCAATTCTAGTATTAATCAATATGAAGCTTTGTTATTGGAAATCTCTTGCACATTTTTGGTACTTTTTTTGGGTGTCACATTGGCTTTTGACAAAAAAAGGTCAAAGAATATGGGTTTACCAATGGTATGTTTGGTGATAGCTGGGGCCATGGCATTGGCGGTATTTGTGTCAATAACAGTAACGGGCCGGGCTGGTTATGCTGGTGTTGGGCTTAACCCAGCGAGATGCTTAGGTGCGGCGTTGCTTCATGGGGATTCGTTATGGAATGGACATTGGGTTTTTTGGGTTGGGTCTATCATAGCTTGTTTAATCTATTATAGTGTCTCTATCAACCTACCAAACCAGGGTTCAACTTCCGATGACGGAGAATATGTTGTCTTAAAGTTGGCTCGAGGTTCTCTTGATAATATTCGTAAGGGTGATATTTCAAATGATATCACAATAGAACGAAGTGGCTTTCAAGAATATTTATCGTGTACTACACAAATATGA 1002 0.3912 MNSVNSRIADEKLSMSIQSNEKIVLGPKNPLKGKFQASIGADEFFSLETWKAAMTELVATASLMVTLSTSIIACLDSHEVDPKLIIPFAVFINAFLFLIATVPLSGGHMSPVFTCIAALKGVVTLYRALLYVIAQCIGSIIGFYILKCVMDPRLVNTYSLGGCAIGGKGINSSINQYEALLLEISCTFLVLFLGVTLAFDKKRSKNMGLPMVCLVIAGAMALAVFVSITVTGRAGYAGVGLNPARCLGAALLHGDSLWNGHWVFWVGSIIACLIYYSVSINLPNQGSTSDDGEYVVLKLARGSLDNIRKGDISNDITIERSGFQEYLSCTTQI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02469 333 SUPERFAMILY Aquaporin-like 47 274 IPR023271 -
Trre7g02469 333 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre7g02469 333 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre7g02469 333 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre7g02469 333 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre7g02469 333 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre7g02469 333 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre7g02469 333 Pfam Major intrinsic protein 46 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre7g02469 333 Gene3D Glycerol uptake facilitator protein. 37 284 IPR023271 -
Trre7g02469 333 PANTHER AQUAPORIN-LIKE 17 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02469 Trre-Chr7 20358679 20360178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02469 22 274 Major Intrinsic Protein MIP AT3G54820 29.304 2.01e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02469 K09866 - gmx:100804160 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02469 7 20358679 20360178 Trre7g02469 7 20358679 20360178 ECH