Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02444 ATGGTTAGTGCAAATAGGCTAATAGAAATGGCGAAAAAGTGGCAAAAAATGGCGGCTCAAAAACGCAAGAGGATCTCATACTTAAGAAATGAAGCGGATATGAAATCTTCATCGGTAAATAAGGGTCACTTTGTTGTTTACAGCATCGACCATAAGAGGTTTGTGGTTCCTCTAAAGTATCTTAGCACAAACGTGTTTAGAGAACTCTTTAAATGGTCTGAGGAAGTGTTCGGATTACCAACAACTGGACCTATTATGTTCCCATGCGATAGTGTTTTCTTGGACTACGCAATCTCTTTAGTTCAAGAACAAATTCCTGAAGATGTGGAGAAGGCTTTGATCACTTTCATGTATGCTTGTCAAAACGAAGCATCTTCCTTTCATGATCTTAGGCAAAATAATGAACACATAATTATTTATGGTTTTTGA 429 0.373 MVSANRLIEMAKKWQKMAAQKRKRISYLRNEADMKSSSVNKGHFVVYSIDHKRFVVPLKYLSTNVFRELFKWSEEVFGLPTTGPIMFPCDSVFLDYAISLVQEQIPEDVEKALITFMYACQNEASSFHDLRQNNEHIIIYGF 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02444 142 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 133 IPR003676 GO:0009733
Trre7g02444 142 Pfam Auxin responsive protein 12 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02444 Trre-Chr7 20102919 20103347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02444 6 101 Calmodulin-binding Proteins AT4G34750 30.928 6.49e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02444 - - ccaj:109798531 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02444 7 20102919 20103347 Trre7g02444 7 20102919 20103347 ECH