Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02440 ATGAGTACTGAAGAAATTACACTTCCAGGATTCCGATTTCACCCCACAGAAGAAGAACTCCTTGATTTCTATCTTAAAAATATGGTTGTTGGTAAAAAACTTCGTTTTGATGTCATTGGTTTTCTCAACATCTATCACCATGATCCTTGGGATTTGCCAGGTTTGTCAAAGGTTGGGGAAAGAGAATGGTATTTCTTTGTGCCAAGGGACAAAAAACATGGTAGTGGAGGAAGGCCTAACCGCACAACTGAAAAAGGTTTCTGGAAAGCAACCGGTTCGGATCGGAAAATTGTGACCTTATCTGATCCGAAGCGGATAATCGGATTGAGGAAGACGTTGGTTTTCTACGAGGGAAGAGCTCCTCGTGGAAGCAAGACCGATTGGGTCATGAACGAGTACCGTTTACCTGACAATAGTTCCTTGCCTAAGGACATAGTGTTATGCAAGATATATAGAAAGGCAACTTCCTTGAAAGTGTTGGAACAAAGAGCAGCAGAAGAGGAAGAAATGAAACAAATGTTGGGTTCCCCTACATCACCACCTTCCTCTACGGACACAATCTCTTTTAGCTACACACAACAACAACAAGACCAACACGTGTCCCTACCCATGTTGTTCCAACAAGTCATTCCTAAGAAAGAATCTGAACCAGAAATTGAAACTGAAATTGATGACATGGTTTCTTTTAGTCATGAAAAAATTGTGAAAGATAACAAAAAGACTTGTGGAACATCTTTGCAATTGCCCTTAGGGAAGGACAATGTGCCTGAGTTACAGTTACCTATAGCTGCGGATTGGACCCAAGATACGTTTTGGGCTCAGCTTAATAGTCCTTGGCTGCAAAATTGGACTGCTTATTCCAACATTCTTAATTTCTAA 879 0.4107 MSTEEITLPGFRFHPTEEELLDFYLKNMVVGKKLRFDVIGFLNIYHHDPWDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGSKTDWVMNEYRLPDNSSLPKDIVLCKIYRKATSLKVLEQRAAEEEEMKQMLGSPTSPPSSTDTISFSYTQQQQDQHVSLPMLFQQVIPKKESEPEIETEIDDMVSFSHEKIVKDNKKTCGTSLQLPLGKDNVPELQLPIAADWTQDTFWAQLNSPWLQNWTAYSNILNF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02440 292 FunFam NAC domain-containing protein 67-like 16 157 - -
Trre7g02440 292 Gene3D NAC domain 16 157 IPR036093 GO:0003677|GO:0006355
Trre7g02440 292 ProSiteProfiles NAC domain profile. 7 153 IPR003441 GO:0003677|GO:0006355
Trre7g02440 292 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Trre7g02440 292 SUPERFAMILY NAC domain 8 153 IPR036093 GO:0003677|GO:0006355
Trre7g02440 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02440 Trre-Chr7 20054826 20056701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02440 4 289 NAC Transcription Factor Family AT2G17040 61.111 1.41e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre7g02440 NAM 3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02440 - - adu:107477264 454.136