Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02439 ATGGCATCAATGGAAGACATCAACATGAGTACTGAAGAAATTACACTTCCAGGATTCCGATTTCACCCCACAGAAGAAGAACTCCTTGATTTCTATCTTAAAAATATGGTTGTTGGTAAAAAACTTCGTTTTGATGTCATTGGTTTTCTCAACATCTATCACCATGATCCTTGGGATTTGCCAGGTTTGTCAAAGGTTGGGGAAAGAGAATGGTATTTCTTTGTGCCAAGGGACAAAAAACATGGTAGTGGAGGAAGGCCTAACCGCACAACTGAAAAAGGTTTCTGGAAAGCAACCGGTTCGGATCGGAAAATTGTGACCTTATCTGATCCGAAGCGGATAATCGGATTGAGGAAGACGTTGGTTTTCTACGAGGGAAGAGCTCCTCGTGGAAGCAAGACCGATTGGGTCATGAACGAGTACCGTTTACCTGACAATAGTTCCTTGCCTAAGGACATAGTGTTATGCAAGATATATAGAAAGGCAACTTCCTTGAAAGTGTTGGAACAAAGAGCAGCAGAAGAGGAAGAAATGAAACAAATGTTGGGTTCCCCTACATCACCACCTTCCTCTACGGACACAATCTCTTTTAGCTACACACAACAACAACAAGACCAACACGTGTCCCTACCCATGTTGTTCCAACAAGTCATTCCTAAGAAAGAATCTGAACCAGAAATTGAAACTGAAATTGATGACATGGTTTCTTTTAGTCATGAAAAAATTGTGAAAGATAACAAAAAGACTTGTGGAACATCTTTGCAATTGCCCTTAGGGAAGGACAATGTGCCTGAGTTACAGTTACCTATAGCTGCGGATTGGACCCAAGATACGTTTTGGGCTCAGCTTAATAGTCCTTGGCTGCAAAATTGGACTGCTTATTCCAACATTCTTAATTTCTAA 903 0.4109 MASMEDINMSTEEITLPGFRFHPTEEELLDFYLKNMVVGKKLRFDVIGFLNIYHHDPWDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGSKTDWVMNEYRLPDNSSLPKDIVLCKIYRKATSLKVLEQRAAEEEEMKQMLGSPTSPPSSTDTISFSYTQQQQDQHVSLPMLFQQVIPKKESEPEIETEIDDMVSFSHEKIVKDNKKTCGTSLQLPLGKDNVPELQLPIAADWTQDTFWAQLNSPWLQNWTAYSNILNF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02439 300 FunFam NAC domain-containing protein 67-like 24 165 - -
Trre7g02439 300 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Trre7g02439 300 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 210 - -
Trre7g02439 300 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Trre7g02439 300 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Trre7g02439 300 SUPERFAMILY NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02439 Trre-Chr7 20054826 20056725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02439 12 297 NAC Transcription Factor Family AT2G17040 61.111 1.51e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre7g02439 NAM 3.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02439 - - gmx:732555 459.529