Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02430 ATGGAACCTCAGGTTGCAGTTCCTCGCAGAGTAAGGTCAGGTTGCAGAGGTAGAAGAAGTGTTGTTCAAAGGAGTAACAATCGAAGGTCCAGATCCCGTTGGATTCAGGTGAGGGTGGTGATCCCCGCCGCTGACCCTCTGGTCCCTACATTGGTTATGGAAAAAGGATCGGGAAGCAAAAAACCAAAACGTAAGAAAGACAAACCCTCGGGATCAGACTCGGTATCGGGAACGAAAAAGCAGGCAAGCTTTGGAATTTTCTTGGGGTTTCATCTTCATTACTCTTCAATTTCAAAACCCACTAAGGGATTAGTTGCTTGTTTTCTCCTTAACCATGGTTTTGCTATGTTGCAAGAAGGGTCATCTTCTGCTTCTTCACCCTTAAAGTTTTTCTCCATGATGCCAGTTTCACCTAGCTTAGGATTTCCACATTCTTGGCTTAAAGAACTGAAATCTGAAGAAAGGGGTTTGTACTTGATCCATTTGTTGCATGCTTGTGCTAATCAGGTAGCTAATTGTAATCTTGAGAATGCAAATGCAACACTTGAGCAAATTTCCATGCTTGCTTCCCCTACCGGCGACACCATGCAGCGAATCGCAGCCTATTTTACGGAAGCACTTGCTGATAGGATACTCAAAGCATGGCCTGGTCTCCACAAAGCAGTTAACTCTACTAGAATGGTTATGGCTTCAGAAGAGATTCTTGTGCAGAGGCTCTTTTTTGAGCTTTTCCCTTTCTTGAAGGTAGCTTATATTCTTACCAATCAAGCTATCATCGAAGCGATGGAAGGGGAGAAGATAGTTCACATAATTGATCTCAATGCTGTTGAACCTTCTCCATGGATTGCACTCTTACAAGTTTTGAGCACGCGTCCCGAAGGCCCTCCGCATTTGAGAATCACCAGCGTTCATCCGAAGAAAGAAGTTCTCGACCGGATTGCTCATAGACTGACTGAAGAAGCTGAAAAGTTGGATATACCATTCCAATTCAATCCCATTGTCAGCAAATTAGAAAACCTCGAGTTTGAGAAACTTCGTGTTAAAACCGGCGAGGCATTAGCAATTAGTTCTGTCCTCCAATTACATACCCTTTTAACATTGGATGATGCAAAGAGAAAATCTCCTCTTTTGTCACAACCCTCAAATGAAATTCACTTTCAAAATTCCCATCCAATGAACCAAACTACATTAGGTGATTTGGTCGAGAAAGATACGGTTAACGGATATACCAGAAGTCTTGAATCAATCTCATCACCACCGGCTTCAATTAACATGGAAAAATTTCTCAATGCCTTGTGGAGTTTATCACCAAAGATAATGGTTGTAACCGAACAAGACTCGAACCATAATGGCTCAACTCTTATGGAAAGGCTTCTAGAAGCTTTATACTCTTATGCAGCATTATTTGATTGTTTGGAATTAACAGTCCCAAGAAACTCATTGGAGAGATTTAAGGTCGAGAAGATGCTTTTCGGCGAGGAAATCAAGAACATTATTGCATGTGAAGGATTAGAAAGAAAGGAAAGACATGAAAAGCTTGATAAGTGGTTTATGAGATTTGATTGTACTGGATTTGGTCATGTGCCTTTAAGTTATTTTGGTAGGTTACAAGCAAGGAGGTTTCTGCAGAATTATGGTTGTGCTGGATATAAAATGAAGGAAGAAAATGGTTGTGTTGTAATCTATTGGCAAGATAGGTCCTTGTTTTCAATATCAGCTTGGAAATCTATGAAGACATAA 1740 0.4098 MEPQVAVPRRVRSGCRGRRSVVQRSNNRRSRSRWIQVRVVIPAADPLVPTLVMEKGSGSKKPKRKKDKPSGSDSVSGTKKQASFGIFLGFHLHYSSISKPTKGLVACFLLNHGFAMLQEGSSSASSPLKFFSMMPVSPSLGFPHSWLKELKSEERGLYLIHLLHACANQVANCNLENANATLEQISMLASPTGDTMQRIAAYFTEALADRILKAWPGLHKAVNSTRMVMASEEILVQRLFFELFPFLKVAYILTNQAIIEAMEGEKIVHIIDLNAVEPSPWIALLQVLSTRPEGPPHLRITSVHPKKEVLDRIAHRLTEEAEKLDIPFQFNPIVSKLENLEFEKLRVKTGEALAISSVLQLHTLLTLDDAKRKSPLLSQPSNEIHFQNSHPMNQTTLGDLVEKDTVNGYTRSLESISSPPASINMEKFLNALWSLSPKIMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLELTVPRNSLERFKVEKMLFGEEIKNIIACEGLERKERHEKLDKWFMRFDCTGFGHVPLSYFGRLQARRFLQNYGCAGYKMKEENGCVVIYWQDRSLFSISAWKSMKT 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02430 579 MobiDBLite consensus disorder prediction 12 26 - -
Trre7g02430 579 MobiDBLite consensus disorder prediction 1 28 - -
Trre7g02430 579 ProSiteProfiles GRAS family profile. 150 575 IPR005202 -
Trre7g02430 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 144 570 IPR005202 -
Trre7g02430 579 MobiDBLite consensus disorder prediction 51 78 - -
Trre7g02430 579 Pfam GRAS domain family 159 575 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02430 Trre-Chr7 19898996 19904368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02430 115 578 GRAS Transcription Factor Family AT1G50420 64.033 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre7g02430 GRAS 4.2e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02430 - - gmx:100814131 711.064