Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02404 ATGGAGATAGAGCAAAACATAGGTAATGATGTTGGCAACAATGAAATGATGAAAGATGTTTCAAAAAGAGGGATGCATCTAGTGTGGGAAGATTTGAGTGTTGTAATTCCAAACTTTGGGAGTGGACACACAAAAAGATTGCTTAACGGTTTGAATGGATATGCTGAACCTAACAGAATCATGGCTGTTATGGGTCCATCTGGCTCTGGAAAATCTACTCTTCTTGATGCTTTGGCAGGTAGACTCTCTGGAAATGTTATCATGTCTGGTAAAGTGCTTTTAAATGGAAAGAAAAGAAGATTAGACTATGGGGTTGTAGCCTATGTAACACAAGAAGACATATTGTTGGGAACACTAACAGTTAGAGAGACAATATCATACTCAGCAAATTTAAGGCTTCCATGTAGCATGACAAAAGAAGAGGTAAATGACATTGTAGAGGGTACAATTATGGAAATGGGTCTTCAAGATTGTGCTAATAGACTTATTGGAAATTGGCACTTAAGAGGTATAAGTGGTGGTGAAAAGAAAAGATTAAGTATAGCACTTGAAATATTAACAAGGCCTTCTCTCTTGTTCCTTGATGAACCTACAAGTGGTTTGGACAGTGCCTCAGCATATTTTGTTGCTCAAACTTTGAGAAACATTGCTCATGATGGAAAAACTGTTATTTCTTCTATTCATCAACCAAGTAGTGAGGTTTTTGCATTATTTGATGATCTTTTTCTACTTTCTGGGGGACAAACTATTTACTTTGGACCAGCTGATAAAGCAGTTGAGTTCTTTGGCAAAGCAGGATTTCCATGTCCAAGTAGAAGAAACCCTTCGGATCATTTCCTCCGTTGTATTAATTCCGACTTCGACACTGTCACAACTACTATGGCCTCACGGAGTACACATGAACAAAAAACATTAGCACCATCAACAATGAACTTACCAACAGCAGCAATCAAAGCAATACTGATAGAGAAATACCGTTGGTCGGAATATGCAATTTGTGCAAGAGCGAGAATCAAAGAAATCTCAAACTTTGTCGAAGGACATGATTATGAAAGTAAAATCAAGAGCCAAGCCAAATGGTGGAAGCAATTATCAACTTTGACAAAAAGATCTTTTGTGAACATGTCTAGAGATGTAGGGTACTATTGGATAAGGTTAACAATCTATGTCGCCTTATCTTTGTCTGTCGGGACAATCTTTTTCGACGTTGGATCAAGTTATAGATCCATTTTTGCAAGAGGAGCTTGTGGCGCATTTATATCGGGTTTCATGACATTCATGTCCATAGGAGGCTTCCCATCATTCATAGAAGAAATGAAGGTCTTCTATAAAGAAAGGCTAAATGGATATTATGGAATTGCAGTCTACATTCTGTCAAATTTTCTCTCTTCATTTCCTTTTGTAGCTGTGATGTCATTTGCTACCGGGACAATAACATATTATATGGTTAGGTTTCGTCCTGAGTTTTCACATCTTTTGTATATCTGTTTGGATCTTCTGGGGTGTATCGCGGTTGTGGAGACCTCAATGATGATTATAGCTGCATTGGTTCCCAACTTTCTTTTGGGATTGATAATTGGAGCAGGATATATTGGTCTTATGATGATGACTGCTGGCTATTTTCGACAGATCTACGATCTTCCTAAATTCTTCTGGCGTTACCCTATTTCATACATCAATTACGGTGCATGGGCATTGCAGGGAGCATTCAAGAATGACTTGATTGGGATGGAGTTTGATCCTATGACACCTGGTGGCTCAAAACTTAAAGGAGAAATAATCCTCACAACAATGCTAGGAATGAAAGATGATTATTCAAAATGGTGGGATCTAGCTGTGGTCATCTTCATCCTCGTATTGCTTCGAGTTATTTTCTTTTTCATTCTCAAATTTAAGGAGAGAGCAATACCTTTCCTTCACAGTATCTACACAAAGCAAACACTGGAATGTATCATGAAGCGGCCTTCGTTCAGGAAAACACCATCGTTCGCTTCCAAGAGACACCAACCACTGCATCCAATGTCTTCTCAAGAGGGTCTCAACTCTCCATGTCACTAG 2058 0.3868 MEIEQNIGNDVGNNEMMKDVSKRGMHLVWEDLSVVIPNFGSGHTKRLLNGLNGYAEPNRIMAVMGPSGSGKSTLLDALAGRLSGNVIMSGKVLLNGKKRRLDYGVVAYVTQEDILLGTLTVRETISYSANLRLPCSMTKEEVNDIVEGTIMEMGLQDCANRLIGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAYFVAQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGPADKAVEFFGKAGFPCPSRRNPSDHFLRCINSDFDTVTTTMASRSTHEQKTLAPSTMNLPTAAIKAILIEKYRWSEYAICARARIKEISNFVEGHDYESKIKSQAKWWKQLSTLTKRSFVNMSRDVGYYWIRLTIYVALSLSVGTIFFDVGSSYRSIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGIAVYILSNFLSSFPFVAVMSFATGTITYYMVRFRPEFSHLLYICLDLLGCIAVVETSMMIIAALVPNFLLGLIIGAGYIGLMMMTAGYFRQIYDLPKFFWRYPISYINYGAWALQGAFKNDLIGMEFDPMTPGGSKLKGEIILTTMLGMKDDYSKWWDLAVVIFILVLLRVIFFFILKFKERAIPFLHSIYTKQTLECIMKRPSFRKTPSFASKRHQPLHPMSSQEGLNSPCH 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02404 685 MobiDBLite consensus disorder prediction 661 685 - -
Trre7g02404 685 Pfam ABC-2 type transporter 228 289 IPR043926 GO:0140359
Trre7g02404 685 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 18 651 - -
Trre7g02404 685 FunFam ABC transporter G family member 11 21 265 - -
Trre7g02404 685 MobiDBLite consensus disorder prediction 669 685 - -
Trre7g02404 685 CDD ABCG_EPDR 24 253 - -
Trre7g02404 685 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 271 IPR003439 GO:0005524
Trre7g02404 685 Gene3D - 13 265 IPR027417 -
Trre7g02404 685 Pfam ABC-2 type transporter 363 572 IPR013525 GO:0016020|GO:0140359
Trre7g02404 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 268 IPR027417 -
Trre7g02404 685 ProSitePatterns ABC transporters family signature. 171 185 IPR017871 GO:0005524|GO:0016887
Trre7g02404 685 SMART AAA_5 57 256 IPR003593 GO:0016887
Trre7g02404 685 Pfam ABC transporter 48 199 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02404 Trre-Chr7 19610140 19618273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02404 46 242 Calmodulin-binding Proteins AT2G36910 29.493 8.73e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02404 K05681 - gmx:100788651 1137.48