Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02365 ATGGCTTATATGTGTGCAGACAGTGGAAATCTAATGGCAATTGCTCAACAAGTCATCAATCAAAAACAACAACAACAACAAGAACAACAAGAACAGCAACATCATCATCATCAAAATCTCTTAGGTTTAACCAACCCTCTCTCTCTTCATCCATGGAACAACAACAACAATAATAATACTCCAGTTTCATCACTACCACCTTTATCTTTCCCACCCACAGATTTCACCGACCCATTTCAAGTCGGGTCGGGTCAAGAAACTCCCGATCCCACTTTCCATTTCCCTCCCCCACTCGACCCTCACTCCACCACCTTCCGTTTCTCCGATTTCGATTCCGATGACTGGATGGACACTTTAATGGCCGCCGCTGACACACAAACACAAGATTTTCATCTCAGTCCGTTTTCATCCAACCCGACCCGACTCTCTCCACAATCGGATCTTCTCTTACCCGTCGCCACCGTTCCACTCCAAATCCCAACACAACAACCACCACCCACTCCGCAACGCAAAAACCACACCACCACAACCGAAACGACGTCGTCTACTACTACTACAAACCCTATTCTAAAATCCTTAATCGAAATCGCTTCTTTAATCGAAACCGAACCAAATCAAGCCATTGAAACCCTAACTCATCTCAACAAATCAATTTCACAAAACGGAAACCCTAATCAAAGAGTTTCATTCTACTTCTCACAAGCTTTAACCAACAAAATCACTTCACAATCACAAATTTCTTCACCAACAACTACATGGGAAGAATTAACACTCTCTTACAAAGCCCTAAACGATGCATGTCCTTATTCTAAATTCGCACATTTAACCGCAAATCAAGCAATTCTCGAAGCAACCGAAGGAGCAACGAATATTCACATCGTTGATTTTGGAATTGTTCAGGGGATTCAATGGGCCGCATTATTACAAGCATTTGCAACTCGTTCTTCTGGTAAACCTAATAGTGTAAGAATTTCTGGTATACCTGCTATGGCTTTAGGAACTTCACATGTTTCTTCAATTTCAGCTACTGGTAATCGTTTATCTGAATTTGCGAAACTTTTAGGGTTAAATTTTGAGTTTACGCCGATTCTTACACCGATTCAGTTGCTTAATGAGTCTAGCTTTTGTATTCAACCAAATGAGGCTTTAGCTGTTAATTTCATGCTTCAATTGTATAATCTTTTGGATGAGACTATGGATGCTGTTGAAACCGCGCTTCGTTTGGCTAAATCCTTGAATCCTAAAATTGTTACTCTCGGTGAATATGAAGCTAGTTTGACGACTCGGGTTGGTTTTGTTGATCGGTTTAAGACTGCTTTTAATTATTTTGCTGCTTTTTTCGAGAGTTTGGAGCCGAACATGGCGTTGGATTCGCCTGAGAGGTTTCAGGTGGAGAGTCTTTTACTTGGTAGGAGAATTGATGGTGTTATTGGTGTGAGGGAAAGGATGGAGGATAAAGAACAGTGGAAGATTTTGATGGAAAAATGCGGTTTTGAATCGGTTAGTTTGAGTCATTATGCAATTAGTCAAGCTAAGATATTGTTGTGGAATTATAGTTATAGTTCTTTGTATTCTCTTGTTGAATCTCAACCAGGGTTTTTGTCTTTGGCTTGGAAAGATGTTCCTCTATTGACTGTTTCTTCTTGGCGTTGA 1653 0.4059 MAYMCADSGNLMAIAQQVINQKQQQQQEQQEQQHHHHQNLLGLTNPLSLHPWNNNNNNNTPVSSLPPLSFPPTDFTDPFQVGSGQETPDPTFHFPPPLDPHSTTFRFSDFDSDDWMDTLMAAADTQTQDFHLSPFSSNPTRLSPQSDLLLPVATVPLQIPTQQPPPTPQRKNHTTTTETTSSTTTTNPILKSLIEIASLIETEPNQAIETLTHLNKSISQNGNPNQRVSFYFSQALTNKITSQSQISSPTTTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGATNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSHVSSISATGNRLSEFAKLLGLNFEFTPILTPIQLLNESSFCIQPNEALAVNFMLQLYNLLDETMDAVETALRLAKSLNPKIVTLGEYEASLTTRVGFVDRFKTAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVRERMEDKEQWKILMEKCGFESVSLSHYAISQAKILLWNYSYSSLYSLVESQPGFLSLAWKDVPLLTVSSWR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02365 550 ProSiteProfiles GRAS family profile. 180 550 IPR005202 -
Trre7g02365 550 MobiDBLite consensus disorder prediction 43 69 - -
Trre7g02365 550 MobiDBLite consensus disorder prediction 43 64 - -
Trre7g02365 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 188 545 IPR005202 -
Trre7g02365 550 Pfam GRAS domain family 191 550 IPR005202 -
Trre7g02365 550 MobiDBLite consensus disorder prediction 168 185 - -
Trre7g02365 550 MobiDBLite consensus disorder prediction 158 185 - -
Trre7g02365 550 Coils Coil 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02365 Trre-Chr7 19211853 19213505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02365 1 550 GRAS Transcription Factor Family AT5G66770 53.058 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre7g02365 GRAS 2.1e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02365 - - adu:107477343 647.506