Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g02356 ATGGCTACAAATTTCAACTGCAACATGACCCAAAACATAATCACAACTCATCCTCATTGGTATTCATCAAAAACTGGAATTTACAGTAGTGTTCATTCTCCTTTGAATCTTCCAACTGACCCTTTTGTTGACATTGTTTCTTTCATTTTTTCACATCCTCATAATGGGGTTTTAGCCCTTATTGATTCCTCATCTGGGTTTTCCATTTCTTACTCAAAGTTGTTACCTTTAGTCAAATCTATGGCTTCTGGTTTACATAAAATGGGTGTTTCAAAAGGTGATGTTGTTTTGCTTTTACTTCCAAATTCAATTTACTATCCTGTTATATTATTGGCTGTTTTGTATTTAGGTGCTGTTGTTACACCATTGAATCCTCTTAGTACTGTTGGCGAAATTCGTAAACAGGTTAATGAGTGTGGTGTGAGTTTTGCTTTTACTGTGTCTGAAAATGTCAAGAAACTAGAGCTGTTATTAGGAACCAAACCCATTATTGCTGTTCCTGAAAATGACAAGGATTTGAGGAATGAGTGTTTCTCATGTTTTTTTAACCTTATTTATGGTAAATTTGATGTGCCTCCTAGGGTGGTTATTAGGCAGGAAGATACTGCTGGTATATTGTATTCTTCTGGGACCACAGGTGTGAGTAAAGGAGTTGTTTTAACTCATAGAAATCTTATTGCTATGGTTGAGCAATTTGTGAGATTTGAAGCTTCTCAATATGAATACTCGTGTACCACGAATGTGTTTCTAGCTGTTTTGCCAATGTTTCATATATATGGTTTATCGCTTTTTGCTGCTGGATTACTGTCGTTGGGTTCTACGATCGTTGTAATGAGGAAATTTGACATTGATGAGGTTGTTAGGGTGATTGACAAATATAATGTTACACACTTTCCTGTTGTTCCACCGATGGTGTCAGCATTGACAGCGAAGGCAAAAGGTGTTAATGGAAGTAAGTTGCGGAGTTTGAGACAGGTCTCCTGCGGTGCAGCGCCTTTGAGCACAGGAGTTATTAATGGTTTTGTCCATGCTTTTCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAGTCGACTGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTAACAAATATTCTTCAATAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGATTGGAATGGTGCATTTATGCCCCCAGGTGTCGGCGGCGAGCTTTGGTTAAGAGGGCCTTCAATTATGAGAGGGTATTTGAATAATGAAGAAGCTACAATGTCAACAATCGATAAAGATGGTTGGCTACATACCGGAGATATTGTTCATTTTGATCAGGATGGATACTTACACGTGTCTGACCGATTGAAAGACATTATCAAATACAAGGGCTTTCAGATTGCTCCTGCTGATTTAGAAGCGGTGTTAATTTTGCATCCTGAAATAGTCGATGCTGCTGTTACAGCTGCCAAAGATGAAGAAATTGGGGAGATTCCAGTGGCATTTGTGGTAAAGAAAGTTGGAAGTGTACTTTCTCCGAAGCATGTTATCGATTATGTTGCCGAGCAGGTTGCTCCATACAAGAAAGTTCGGAAAGTGTTCTTCACTGACAAGATACCGAGGTCTCCAACTGGGAAGATCCTCCGAAAGGAACTCAGGCATCGCTTGACTTCTAAACTCTAA 1674 0.3913 MATNFNCNMTQNIITTHPHWYSSKTGIYSSVHSPLNLPTDPFVDIVSFIFSHPHNGVLALIDSSSGFSISYSKLLPLVKSMASGLHKMGVSKGDVVLLLLPNSIYYPVILLAVLYLGAVVTPLNPLSTVGEIRKQVNECGVSFAFTVSENVKKLELLLGTKPIIAVPENDKDLRNECFSCFFNLIYGKFDVPPRVVIRQEDTAGILYSSGTTGVSKGVVLTHRNLIAMVEQFVRFEASQYEYSCTTNVFLAVLPMFHIYGLSLFAAGLLSLGSTIVVMRKFDIDEVVRVIDKYNVTHFPVVPPMVSALTAKAKGVNGSKLRSLRQVSCGAAPLSTGVINGFVHAFPNVDFIQGYGMTESTAVGTRGFNTEKFNKYSSIGLLAPNMEAKVVDWNGAFMPPGVGGELWLRGPSIMRGYLNNEEATMSTIDKDGWLHTGDIVHFDQDGYLHVSDRLKDIIKYKGFQIAPADLEAVLILHPEIVDAAVTAAKDEEIGEIPVAFVVKKVGSVLSPKHVIDYVAEQVAPYKKVRKVFFTDKIPRSPTGKILRKELRHRLTSKL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g02356 557 ProSitePatterns Putative AMP-binding domain signature. 205 216 IPR020845 -
Trre7g02356 557 FunFam 4-coumarate--CoA ligase 2 455 556 - -
Trre7g02356 557 Pfam AMP-binding enzyme C-terminal domain 469 543 IPR025110 -
Trre7g02356 557 Gene3D - 455 556 IPR045851 -
Trre7g02356 557 Gene3D - 29 454 IPR042099 -
Trre7g02356 557 CDD 4CL 37 549 - -
Trre7g02356 557 SUPERFAMILY Acetyl-CoA synthetase-like 54 553 - -
Trre7g02356 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 551 - -
Trre7g02356 557 FunFam Long-chain-fatty-acid--CoA ligase FadD 33 454 - -
Trre7g02356 557 Pfam AMP-binding enzyme 57 459 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g02356 Trre-Chr7 19140196 19142857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g02356 10 557 Monolignol Biosynthesis Gene Families AT4G19010 61.162 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g02356 K01904 - gmx:100804808 871.307